Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609296

Identifier: 86609296

GI number: 86609296

Start: 1927300

End: 1927701

Strand: Reverse

Name: 86609296

Synonym: CYB_1840

Alternate gene names: NA

Gene position: 1927701-1927300 (Counterclockwise)

Preceding gene: 86609298

Following gene: 86609289

Centisome position: 63.27

GC content: 58.46

Gene sequence:

>402_bases
ATGCTGTATCTGGCACGGGTACACAAAAAAAGTCTCTTCGGCCAGGGGGAGCTGCAGCTCTTGGCCCGGCAGGCCGAGGA
CGGTGTTTGGATGCCGCTGCGCAAGCCAGAAGGGGTCACCTGCAAAGAGGTTGGCCCTTACAACATTGGGGTGTTGCTGC
TGGTTGAGCTTTCGGAAGAGCGGCAGGTACGGCGGGCGGAAGAGGCAGCCATGAAGCTGGTGGAGATGTTGCACAACCTA
TCCCGAACCCACAGTCTGGTGGATCTGTCGGAGATTGAAAGCTGGCGGCAATCCTTGACTCGGCAAAGCCAAGAGCTGAG
CCGTCGCGAAGCAGAGGTGGCCGCTCGCCAAGAGCAACTGCAACAGTGGGAAAACCGTCTGCGAGAAAAGCTGTCTCCTT
GA

Upstream 100 bases:

>100_bases
GTGGCACGGACAACAAAACCCAGGTTTGGGTGTAGGGACGGGATCCCTCTTCAATAAAAGGGATCGGTGCTAAAATCGGC
AGCATCTTCCTGCATGTTCC

Downstream 100 bases:

>100_bases
GCTCTCAGATCTACTCTTATCTTAAGTAGAGTCATTTTAAGCTAATTGAGAAGCCCCCCAAGTGCTCTGTGCCGCTGCCA
TCACCCCATCTCCTAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL
SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP

Sequences:

>Translated_133_residues
MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL
SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP
>Mature_133_residues
MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEERQVRRAEEAAMKLVEMLHNL
SRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQLQQWENRLREKLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15490; Mature: 15490

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEE
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHH
RQVRRAEEAAMKLVEMLHNLSRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQWENRLREKLSP
HHHHHHHHHHCCC
>Mature Secondary Structure
MLYLARVHKKSLFGQGELQLLARQAEDGVWMPLRKPEGVTCKEVGPYNIGVLLLVELSEE
CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHH
RQVRRAEEAAMKLVEMLHNLSRTHSLVDLSEIESWRQSLTRQSQELSRREAEVAARQEQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQWENRLREKLSP
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA