Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is dnaJ [H]

Identifier: 86609274

GI number: 86609274

Start: 1902974

End: 1903831

Strand: Reverse

Name: dnaJ [H]

Synonym: CYB_1817

Alternate gene names: 86609274

Gene position: 1903831-1902974 (Counterclockwise)

Preceding gene: 86609275

Following gene: 86609270

Centisome position: 62.49

GC content: 43.47

Gene sequence:

>858_bases
ATGAAAGACCTTTACCGCGAGCTGGAATTACAGCCCAATGCAACTCTAGAAGAAATTAAAGAGAGCTACAGGCGGCTTGC
CAAAGAATACCATCCCGATAAACTTCACCCAGATACACCTGTTAAGGGGCGGCAGTACATTGAGGAAAAGTTTAAGTCTA
TTCAGGAAGCATACTCGGTCCTGAGTGATCCTGTGAAGCGAAAAGCCTATGACTCCCAAAGGCTTTCCCAGACTTCGCCC
ACAAAAGGGAGCGGGTATGACCAAGACTTAAAAGCAGAACGCGGTTACAGCACACAAGATGGCAAACCTTGGCCCTTTGA
CTTCGACAAGATAAAGGAAGCTGCAGAAGAGATAGAACGTCGTAAGAAAAACATCGAGGCCAACTATAACCAAAGAGTAG
AGCAAGTTAAGTCTGAGTTAAGGAGAAACTTGATCTCTATCGGAATAAAACAAGAGGAAGCTAAAATTGATCATACCTTT
GCCACCAAAAGTGACACTATACTGGGTGCCCTCTCGCTTTTAGTCCTGAGCTTGTTCATTGGTGCCTTAAGTAGCTCAAT
CGGGCTTGTGCTCTTTCTAATCTCAGTTATTAGTCTTTTTATGGCCATTTTTGATAAAGGATATAGCAAGTCGCAAGTTG
AGAGCGCTAAGAAGCTACAGGAAGAGGCAAAATCAGTAATAGCCCAGATAGAGAAAGATAGGAACTCGAAGCTTTCCCAG
CTTGAGCTTCACTGTAGAAGTAGGATCGATCATTTTAAAGCTGTCCCTATCGAATCTATATCCCCATTTTATAAGTGGGC
TGAGTGGGGAGGATCAGCTATTTTTGCTAACTGCAATGAAGGAAAAGGCAGATGCTAA

Upstream 100 bases:

>100_bases
GAGTCTAGGTATTGAGTAGCACTTTGCAAGGCTTCCCCTCAGGGAATAGGATCCCCGCATCAAAGTAGCTGGCACAAGGC
CCCCTGCGCCGGATCCTCCC

Downstream 100 bases:

>100_bases
AAGCCTAGAAGAAAACTTGAAGATAGCGGCTGGAGTTGCTGTGGGTATTGGCATACTAGCCGCCTTATTTGGGCTGGGAG
GTGGATTTCACCCATTCTGA

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKDLYRELELQPNATLEEIKESYRRLAKEYHPDKLHPDTPVKGRQYIEEKFKSIQEAYSVLSDPVKRKAYDSQRLSQTSP
TKGSGYDQDLKAERGYSTQDGKPWPFDFDKIKEAAEEIERRKKNIEANYNQRVEQVKSELRRNLISIGIKQEEAKIDHTF
ATKSDTILGALSLLVLSLFIGALSSSIGLVLFLISVISLFMAIFDKGYSKSQVESAKKLQEEAKSVIAQIEKDRNSKLSQ
LELHCRSRIDHFKAVPIESISPFYKWAEWGGSAIFANCNEGKGRC

Sequences:

>Translated_285_residues
MKDLYRELELQPNATLEEIKESYRRLAKEYHPDKLHPDTPVKGRQYIEEKFKSIQEAYSVLSDPVKRKAYDSQRLSQTSP
TKGSGYDQDLKAERGYSTQDGKPWPFDFDKIKEAAEEIERRKKNIEANYNQRVEQVKSELRRNLISIGIKQEEAKIDHTF
ATKSDTILGALSLLVLSLFIGALSSSIGLVLFLISVISLFMAIFDKGYSKSQVESAKKLQEEAKSVIAQIEKDRNSKLSQ
LELHCRSRIDHFKAVPIESISPFYKWAEWGGSAIFANCNEGKGRC
>Mature_285_residues
MKDLYRELELQPNATLEEIKESYRRLAKEYHPDKLHPDTPVKGRQYIEEKFKSIQEAYSVLSDPVKRKAYDSQRLSQTSP
TKGSGYDQDLKAERGYSTQDGKPWPFDFDKIKEAAEEIERRKKNIEANYNQRVEQVKSELRRNLISIGIKQEEAKIDHTF
ATKSDTILGALSLLVLSLFIGALSSSIGLVLFLISVISLFMAIFDKGYSKSQVESAKKLQEEAKSVIAQIEKDRNSKLSQ
LELHCRSRIDHFKAVPIESISPFYKWAEWGGSAIFANCNEGKGRC

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Drosophila melanogaster, GI20129487, Length=69, Percent_Identity=53.6231884057971, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24584014, Length=69, Percent_Identity=53.6231884057971, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24762799, Length=74, Percent_Identity=47.2972972972973, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 32559; Mature: 32559

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLYRELELQPNATLEEIKESYRRLAKEYHPDKLHPDTPVKGRQYIEEKFKSIQEAYSV
CHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LSDPVKRKAYDSQRLSQTSPTKGSGYDQDLKAERGYSTQDGKPWPFDFDKIKEAAEEIER
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKKNIEANYNQRVEQVKSELRRNLISIGIKQEEAKIDHTFATKSDTILGALSLLVLSLFI
HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GALSSSIGLVLFLISVISLFMAIFDKGYSKSQVESAKKLQEEAKSVIAQIEKDRNSKLSQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LELHCRSRIDHFKAVPIESISPFYKWAEWGGSAIFANCNEGKGRC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]