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The map label for this gene is ccmL [H]

Identifier: 86609253

GI number: 86609253

Start: 1883784

End: 1884083

Strand: Reverse

Name: ccmL [H]

Synonym: CYB_1795

Alternate gene names: 86609253

Gene position: 1884083-1883784 (Counterclockwise)

Preceding gene: 86609254

Following gene: 86609252

Centisome position: 61.84

GC content: 61.33

Gene sequence:

>300_bases
ATGCGTATTGCCATTGTGCGGGGCACCGTCACCAGCACCCAGAAGGATCCCAGCTTAACGGGCGTGAAGTTTTTGTTGGT
GCAGTACGTCGATCTCGAGGGCCAGCCGCAACCCGATTACGCTGTGGCTGCCGATCCGGTGGGGGCCGGCATTGACGAGT
GGGTGCTGGTTAGCCAAGGCAGTGCCGCTCGCCAGCCGCAAGGAAACCAGACTCGCCCGCTGGATGCGGTGGTGATGGCG
ATCATCGATACCGTCAGCGTTGGCGGTCGCTCTCTCTACAACAAGCGCGATCAACGCTAG

Upstream 100 bases:

>100_bases
CCCACGAGAACCTGGAGTACGTGTTGCCCATTCGCTACACCGAGGATGTGGCTCAGTTCCGCGAAGGGGTAAATGCCATC
CGTCCCTTCACCCGTCCCTG

Downstream 100 bases:

>100_bases
CTGGGATCCCTTCCCTTCTCATCTCTCTTGCTGCCCTTGTCCGCCCTACTGCGTTCTAGAGGCTCACGGTTATGCCTGCT
CACACCTATGCTGCACCGCC

Product: carbon dioxide concentrating mechanism protein CcmL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MRIAIVRGTVTSTQKDPSLTGVKFLLVQYVDLEGQPQPDYAVAADPVGAGIDEWVLVSQGSAARQPQGNQTRPLDAVVMA
IIDTVSVGGRSLYNKRDQR

Sequences:

>Translated_99_residues
MRIAIVRGTVTSTQKDPSLTGVKFLLVQYVDLEGQPQPDYAVAADPVGAGIDEWVLVSQGSAARQPQGNQTRPLDAVVMA
IIDTVSVGGRSLYNKRDQR
>Mature_99_residues
MRIAIVRGTVTSTQKDPSLTGVKFLLVQYVDLEGQPQPDYAVAADPVGAGIDEWVLVSQGSAARQPQGNQTRPLDAVVMA
IIDTVSVGGRSLYNKRDQR

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=40, Blast_Score=82, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 10653; Mature: 10653

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIVRGTVTSTQKDPSLTGVKFLLVQYVDLEGQPQPDYAVAADPVGAGIDEWVLVSQG
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEECC
SAARQPQGNQTRPLDAVVMAIIDTVSVGGRSLYNKRDQR
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MRIAIVRGTVTSTQKDPSLTGVKFLLVQYVDLEGQPQPDYAVAADPVGAGIDEWVLVSQG
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEECC
SAARQPQGNQTRPLDAVVMAIIDTVSVGGRSLYNKRDQR
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]