Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609227

Identifier: 86609227

GI number: 86609227

Start: 1853533

End: 1853763

Strand: Reverse

Name: 86609227

Synonym: CYB_1769

Alternate gene names: NA

Gene position: 1853763-1853533 (Counterclockwise)

Preceding gene: 86609230

Following gene: 86609223

Centisome position: 60.85

GC content: 55.41

Gene sequence:

>231_bases
ATGTCTGCCCGATCCAAGTCCAAAGTGGAGGCCCCTACCAAGGGGATGGATCCCCGCCAGTTTACTGAAGCTGATGTGGC
GGCAATTGCAGAGCGGTTGGAGCGCAATGAGTATCCGACCGTCTTTGGCTGCTTGGAAGACTGGCATGCCCTTCGAGCCG
TTGCCTTTTATGCTCCCCACTTAGTGGCTCCCTATGCACACCTGTTGGAGTGGGAAGTGGATGAAGATTAG

Upstream 100 bases:

>100_bases
AGTAATTAAGAATTTTCTCCCTTTGGGACAGGGAGTATTCAAGTTTTTGGCCAGCGAAAAGAAGAGGCTAAGATCGGCTT
GTAGCGTGTTCAGGCTGCCT

Downstream 100 bases:

>100_bases
GGCTGTCCTTGCAGTTCTTAAAGGGATCCCAGTGCTCAGGGCAACGAGGGGGGAGGATTTCCGTCAGAGCCTTGCCGGCG
AATCAGGTAGCGCACTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSARSKSKVEAPTKGMDPRQFTEADVAAIAERLERNEYPTVFGCLEDWHALRAVAFYAPHLVAPYAHLLEWEVDED

Sequences:

>Translated_76_residues
MSARSKSKVEAPTKGMDPRQFTEADVAAIAERLERNEYPTVFGCLEDWHALRAVAFYAPHLVAPYAHLLEWEVDED
>Mature_75_residues
SARSKSKVEAPTKGMDPRQFTEADVAAIAERLERNEYPTVFGCLEDWHALRAVAFYAPHLVAPYAHLLEWEVDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8648; Mature: 8517

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARSKSKVEAPTKGMDPRQFTEADVAAIAERLERNEYPTVFGCLEDWHALRAVAFYAPH
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LVAPYAHLLEWEVDED
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SARSKSKVEAPTKGMDPRQFTEADVAAIAERLERNEYPTVFGCLEDWHALRAVAFYAPH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LVAPYAHLLEWEVDED
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA