| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609144
Identifier: 86609144
GI number: 86609144
Start: 1760072
End: 1760506
Strand: Direct
Name: 86609144
Synonym: CYB_1684
Alternate gene names: NA
Gene position: 1760072-1760506 (Clockwise)
Preceding gene: 86609142
Following gene: 86609145
Centisome position: 57.77
GC content: 62.07
Gene sequence:
>435_bases ATGTTGCCCAAGCATCGTCCCAAGCAACTGTCGCTGGGCCCTCTGGAGTCGGAAATCTTGGACATCCTCTGGGATCTGGG CAGTGCCAGCACCCGTCAAATCCACGAGCGCATCTTGGCCGATCCGGATCGGGAGCTGGCCTATGCCTCTGTGACTACAG TTTTGCAGCGCTTAAGCCAGAAGGGCTGGGTGAGCTGTGAGCGCCGCACCGATCCCCAAGGGCGGAATCTGCCCATGCTG TGGCGGCCTCGTCTTTCGCGTCAGGAAGCGGCCAGCCTCAGGGCCTTCACCCACCTGCAGCAGTTTTTGGCTGTAGGGGA TCCCGATACGGTGGCAGCCTTTGCCGATAGCCTGGATCAGGCCAGTGTGTCCCAGTTGCAGGCGATTGCCGAACGGCTGC GGGCAGCCCGTCAAGCCAGGAGGGATCCGCGATGA
Upstream 100 bases:
>100_bases AGAACCACCATCTTCGAGCTTAGCGGATCCTTAAAATGGCTGAGGGGTTTGAGACTGCAACGGTTAGTCTAGATAAAAGT TCCTACACCGGCAAAGGCTC
Downstream 100 bases:
>100_bases GCCACTTGGGCATGTTATTGCTGGGCTTGGGCCTCAGTTGGCTGTGGCGAGCCCAGGTGCGCCTGGACAGGAGTGGGGGA TGGGGCCGACGTTGGCAGCG
Product: BlaI/MecI/CopY family transcriptional regulator
Products: NA
Alternate protein names: BlaI/MecI/CopY Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; Transcriptional Repressor CopY Family; CopY Family Transcriptional Repressor; Transcriptional Regulator; Transcriptional Repressor
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR
Sequences:
>Translated_144_residues MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR >Mature_144_residues MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQKGWVSCERRTDPQGRNLPML WRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQASVSQLQAIAERLRAARQARRDPR
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16304; Mature: 16304
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KGWVSCERRTDPQGRNLPMLWRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ASVSQLQAIAERLRAARQARRDPR HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLPKHRPKQLSLGPLESEILDILWDLGSASTRQIHERILADPDRELAYASVTTVLQRLSQ CCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KGWVSCERRTDPQGRNLPMLWRPRLSRQEAASLRAFTHLQQFLAVGDPDTVAAFADSLDQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ASVSQLQAIAERLRAARQARRDPR HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA