Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609119

Identifier: 86609119

GI number: 86609119

Start: 1738816

End: 1740378

Strand: Direct

Name: 86609119

Synonym: CYB_1659

Alternate gene names: NA

Gene position: 1738816-1740378 (Clockwise)

Preceding gene: 86609118

Following gene: 86609120

Centisome position: 57.07

GC content: 63.28

Gene sequence:

>1563_bases
ATGAAGGACTGGCGCGCGTTAAAGGACTGGACAGGGATCCTGGGCATTGGCGTCATCGCCATCGGCCTGGTGGTGGGATC
CGCCTTTACCGGTTGGACGGCTGTGCCCCTGAGCATGCTGGCAACAGGTTTGGCCCTGCTGGTGGTTTGGGGCATCACCC
ACCGGCAGGAGGTGGGGGTCTTCCTCGGTCTGCGTTCCACCCAGACCAACGCCAACATCCTGGTGGCGGTGGCGGCGATG
GCCGTCATTCTAGTGCTGGTGAATGTGGTGGCGGTGCGCTACGACCTGCGGCTGGATCTCACCGAGGAGGGCCTGTTTAC
CCTGTCGCCCCAAACCCGGCAATTGGTGCAGGGATTGGTGCAGCCGGTCAAAGTTTGGGTGGTCACCACTGCGCCGGATC
CCAACTTGCGGGAACAACTGGAGCGCTATCGCCGCCTCAACCCCAACCGCTTCCAGTTTGAGTTTGTGGATCCCAACCGG
GATCCCTTGACCATTCAGCGGCTGCAGGTGACCCAGAACAACACCCTGGTGGTGGAGGCCGGAGAAAGCCGGCAACAACT
GCCTCAGCCCCCTGCCCCTGATCTGGAGAGCAAACTGACCCCCGTCCTGTCCAAAGTGGTCAACCGAGGGGAGTTGCTGG
CCTATTTCGTGCAAGGGCATGGGGAAGTGGGGCTGGAAGCGAGGGAAGGCGCCCCAACTCTGGCTCAGGCGGCGGCAGCC
CTGGGCCAGGAAGGCTATCGGGTAGAGCCCCTCAACTTGGTGCAAGCGGAGATCCCAGAGGATGCGAATGTCCTGGTGCT
GGCGGGGCCACAGCGGGCTTTGTTCCCCGGCGAGGTGGAGAAACTGCAGGATTATCTGGCGAAAGGCGGACGGCTGCTGT
TGTTGATTGGGCCACGGGTGGATGCCGGCCTGGATCCCTTGCTGGAAGAGTGGGGCGTGGTCTTGGGGGATGACATCCTC
ATTGAGGTGAGCAGCGTCAGCCAACTGTTGGGGACAGGGCCGGCGGTTGCCCTGGTTACTACCTACGGGGATCACCCCAT
CACCGCCCCCTTGGCGGCCCAGCGGCTAATGACCCTGTTCCCCCTGGCCCGCTCTGTGGAAACCGAAGCCCGCGAAGGGA
TCCAAGCCACGCCCTTGCTGCGCACCGGCCCGCAAAGCTGGGGGGAGACCAGTCCTGAGCTGGAACGTGGCCCCTTGCAA
TTCGATCCGGATCAGGACAAGCCCGGCCCCCTTACCCTGGGCGTTGCTTTAACCCGCCGTCTGGACACCGACCCAGAACA
GGGCTCGGGATCCCGGCAGGAGGCCCGCCTGGTGGTGATCGGCAATGTCAACTTTGCCCTCAACGGCAACTTGCGGCAGC
AGGGCAACCGGGATCTCTTCTTGAACACCCTCAACTGGCTGACTGAGCAAACGGAGCAGATCTCCATCCGCCCCAAATCC
CTCACGGATCGCCGTCTCACCCTGACCGGTCAAAACTTCCGCTGGCTGGTGCTGGGATCGACGGTCCTTTTGCCCTTGGC
GGCCCTGGGTTCCGGAGCTGCCCTGTGGTGGCAAAGACGGTAG

Upstream 100 bases:

>100_bases
GGCTGTTTGCCACGGTGCAATCGGTGGAAAGCCTGCGCTGGCAACAGAGCTGAGGTCAGATGGGAGGAGTGCGGTGTTCG
CGGCAGCGGTGCGGAGCATT

Downstream 100 bases:

>100_bases
AGCTGGAGGAAAGCAGGCATGTTCAAGCGAACCACCTGGATTCTCCTGGGTTTGGCGGTGGCCTGTTTGCTGGGCTACTT
CCTCTTGGACAACATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKDWRALKDWTGILGIGVIAIGLVVGSAFTGWTAVPLSMLATGLALLVVWGITHRQEVGVFLGLRSTQTNANILVAVAAM
AVILVLVNVVAVRYDLRLDLTEEGLFTLSPQTRQLVQGLVQPVKVWVVTTAPDPNLREQLERYRRLNPNRFQFEFVDPNR
DPLTIQRLQVTQNNTLVVEAGESRQQLPQPPAPDLESKLTPVLSKVVNRGELLAYFVQGHGEVGLEAREGAPTLAQAAAA
LGQEGYRVEPLNLVQAEIPEDANVLVLAGPQRALFPGEVEKLQDYLAKGGRLLLLIGPRVDAGLDPLLEEWGVVLGDDIL
IEVSSVSQLLGTGPAVALVTTYGDHPITAPLAAQRLMTLFPLARSVETEAREGIQATPLLRTGPQSWGETSPELERGPLQ
FDPDQDKPGPLTLGVALTRRLDTDPEQGSGSRQEARLVVIGNVNFALNGNLRQQGNRDLFLNTLNWLTEQTEQISIRPKS
LTDRRLTLTGQNFRWLVLGSTVLLPLAALGSGAALWWQRR

Sequences:

>Translated_520_residues
MKDWRALKDWTGILGIGVIAIGLVVGSAFTGWTAVPLSMLATGLALLVVWGITHRQEVGVFLGLRSTQTNANILVAVAAM
AVILVLVNVVAVRYDLRLDLTEEGLFTLSPQTRQLVQGLVQPVKVWVVTTAPDPNLREQLERYRRLNPNRFQFEFVDPNR
DPLTIQRLQVTQNNTLVVEAGESRQQLPQPPAPDLESKLTPVLSKVVNRGELLAYFVQGHGEVGLEAREGAPTLAQAAAA
LGQEGYRVEPLNLVQAEIPEDANVLVLAGPQRALFPGEVEKLQDYLAKGGRLLLLIGPRVDAGLDPLLEEWGVVLGDDIL
IEVSSVSQLLGTGPAVALVTTYGDHPITAPLAAQRLMTLFPLARSVETEAREGIQATPLLRTGPQSWGETSPELERGPLQ
FDPDQDKPGPLTLGVALTRRLDTDPEQGSGSRQEARLVVIGNVNFALNGNLRQQGNRDLFLNTLNWLTEQTEQISIRPKS
LTDRRLTLTGQNFRWLVLGSTVLLPLAALGSGAALWWQRR
>Mature_520_residues
MKDWRALKDWTGILGIGVIAIGLVVGSAFTGWTAVPLSMLATGLALLVVWGITHRQEVGVFLGLRSTQTNANILVAVAAM
AVILVLVNVVAVRYDLRLDLTEEGLFTLSPQTRQLVQGLVQPVKVWVVTTAPDPNLREQLERYRRLNPNRFQFEFVDPNR
DPLTIQRLQVTQNNTLVVEAGESRQQLPQPPAPDLESKLTPVLSKVVNRGELLAYFVQGHGEVGLEAREGAPTLAQAAAA
LGQEGYRVEPLNLVQAEIPEDANVLVLAGPQRALFPGEVEKLQDYLAKGGRLLLLIGPRVDAGLDPLLEEWGVVLGDDIL
IEVSSVSQLLGTGPAVALVTTYGDHPITAPLAAQRLMTLFPLARSVETEAREGIQATPLLRTGPQSWGETSPELERGPLQ
FDPDQDKPGPLTLGVALTRRLDTDPEQGSGSRQEARLVVIGNVNFALNGNLRQQGNRDLFLNTLNWLTEQTEQISIRPKS
LTDRRLTLTGQNFRWLVLGSTVLLPLAALGSGAALWWQRR

Specific function: Unknown

COG id: COG3225

COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56751; Mature: 56751

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDWRALKDWTGILGIGVIAIGLVVGSAFTGWTAVPLSMLATGLALLVVWGITHRQEVGV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLGLRSTQTNANILVAVAAMAVILVLVNVVAVRYDLRLDLTEEGLFTLSPQTRQLVQGLV
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEECCHHHHHHHHHH
QPVKVWVVTTAPDPNLREQLERYRRLNPNRFQFEFVDPNRDPLTIQRLQVTQNNTLVVEA
CEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEC
GESRQQLPQPPAPDLESKLTPVLSKVVNRGELLAYFVQGHGEVGLEAREGAPTLAQAAAA
CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
LGQEGYRVEPLNLVQAEIPEDANVLVLAGPQRALFPGEVEKLQDYLAKGGRLLLLIGPRV
HCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC
DAGLDPLLEEWGVVLGDDILIEVSSVSQLLGTGPAVALVTTYGDHPITAPLAAQRLMTLF
CCCCCHHHHHCCCEECCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
PLARSVETEAREGIQATPLLRTGPQSWGETSPELERGPLQFDPDQDKPGPLTLGVALTRR
HHHHHHHHHHHCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH
LDTDPEQGSGSRQEARLVVIGNVNFALNGNLRQQGNRDLFLNTLNWLTEQTEQISIRPKS
CCCCCCCCCCCCCCEEEEEEECCEEEECCCHHHCCCCEEEHHHHHHHHCCCCEEEECCCC
LTDRRLTLTGQNFRWLVLGSTVLLPLAALGSGAALWWQRR
CCCCEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKDWRALKDWTGILGIGVIAIGLVVGSAFTGWTAVPLSMLATGLALLVVWGITHRQEVGV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
FLGLRSTQTNANILVAVAAMAVILVLVNVVAVRYDLRLDLTEEGLFTLSPQTRQLVQGLV
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEECCHHHHHHHHHH
QPVKVWVVTTAPDPNLREQLERYRRLNPNRFQFEFVDPNRDPLTIQRLQVTQNNTLVVEA
CEEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEEEC
GESRQQLPQPPAPDLESKLTPVLSKVVNRGELLAYFVQGHGEVGLEAREGAPTLAQAAAA
CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHH
LGQEGYRVEPLNLVQAEIPEDANVLVLAGPQRALFPGEVEKLQDYLAKGGRLLLLIGPRV
HCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC
DAGLDPLLEEWGVVLGDDILIEVSSVSQLLGTGPAVALVTTYGDHPITAPLAAQRLMTLF
CCCCCHHHHHCCCEECCCEEEEHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
PLARSVETEAREGIQATPLLRTGPQSWGETSPELERGPLQFDPDQDKPGPLTLGVALTRR
HHHHHHHHHHHCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHH
LDTDPEQGSGSRQEARLVVIGNVNFALNGNLRQQGNRDLFLNTLNWLTEQTEQISIRPKS
CCCCCCCCCCCCCCEEEEEEECCEEEECCCHHHCCCCEEEHHHHHHHHCCCCEEEECCCC
LTDRRLTLTGQNFRWLVLGSTVLLPLAALGSGAALWWQRR
CCCCEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA