| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609118
Identifier: 86609118
GI number: 86609118
Start: 1737983
End: 1738768
Strand: Direct
Name: 86609118
Synonym: CYB_1658
Alternate gene names: NA
Gene position: 1737983-1738768 (Clockwise)
Preceding gene: 86609117
Following gene: 86609119
Centisome position: 57.05
GC content: 56.87
Gene sequence:
>786_bases ATGAACGGAGTGGTTGCCATTTTTCGCAAAGAGCTGCGCGGCTACTTCACCTCCCCCATTGCCTATGTGGTGGCCGCGGT GTTTTGGGGACTGGCGGGGTTTTTCTTCTTTAATATTCTGGTGCGGGTGATCAGCTTTTCTCAGCAGGTGGATCTTTTCG CCCAGTTCGGCCAGGAGAACAATTTCGACGCGGCCACCATCCTGTCGCAGCAGTTTCTCAACCTCTTGGGCACCCTCTCC TTATTTCTATTGCCCATCTTCACCATGAGCTCCTATGCCGAGGAGCGGCGGCGAGGCACGATGGAGCTGCTGGCTACTTC TCCCATCACCAACTTGGAGGTGGCCCTGGGCAAATGGTTGGCGGTCTGGGTGTTTTTCATCACGCTGCTGCTGCCGCCGC TGGTCTACCATGTGCTGGTGCTGAGCAGCGCCAACCCGGCAGTGGACTACCGCCTGACCCTGATGGGTTATGTGGGCCTA ACCCTGCTGGCGGGTAGCGTTATGGCCTTGGGGTTGTTTATCTCTTCTCTGACAGACAGCACCCTCATCGCAGCAGTGGC CACCTTTGGCTTGATTTTGTTGCTCTGGGTGATCGACGCGGCAGCCGGCCAGGAGGAAAACTGGATTGCTGCAACGCTGC GGCATGTGTCTTTGCTGCAGCAATATAGCAACTGGGTGCAAGGGATCCTCAGCAGCAGCAGCCTCATTCTTTTCTTGAGC ATCATCGTCCTGGGGCTGTTTGCCACGGTGCAATCGGTGGAAAGCCTGCGCTGGCAACAGAGCTGA
Upstream 100 bases:
>100_bases TCGACCTCTACGAGATAGGCCGCCCGCAGGCTTCTTTGGAAGAGATTTTCCTGCAGCTCACTACGCAAGAGGGATCCGAG GGCCTACTGGAGGAAGCGGC
Downstream 100 bases:
>100_bases GGTCAGATGGGAGGAGTGCGGTGTTCGCGGCAGCGGTGCGGAGCATTATGAAGGACTGGCGCGCGTTAAAGGACTGGACA GGGATCCTGGGCATTGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Permease; ABC-2 Type Transport System Permease Protein; Gliding Motility Protein GldF; ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease; Abc Transporter Permease Protein; ABC-2 Type Transporter Superfamily Protein; Protein Involved In Gliding Motility Gldf; Permease Of ABC Transporter; Cytochrome C-Type Biogenesis Protein CcmB; ABC-Type Transport System Permease; Multi-Copper Maturation ABC Transporter Permease; CcmB Protein; ABC-2 Type Transporter Permease; Permease Protein Of ABC Transporter; ABC Transporter Family Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNGVVAIFRKELRGYFTSPIAYVVAAVFWGLAGFFFFNILVRVISFSQQVDLFAQFGQENNFDAATILSQQFLNLLGTLS LFLLPIFTMSSYAEERRRGTMELLATSPITNLEVALGKWLAVWVFFITLLLPPLVYHVLVLSSANPAVDYRLTLMGYVGL TLLAGSVMALGLFISSLTDSTLIAAVATFGLILLLWVIDAAAGQEENWIAATLRHVSLLQQYSNWVQGILSSSSLILFLS IIVLGLFATVQSVESLRWQQS
Sequences:
>Translated_261_residues MNGVVAIFRKELRGYFTSPIAYVVAAVFWGLAGFFFFNILVRVISFSQQVDLFAQFGQENNFDAATILSQQFLNLLGTLS LFLLPIFTMSSYAEERRRGTMELLATSPITNLEVALGKWLAVWVFFITLLLPPLVYHVLVLSSANPAVDYRLTLMGYVGL TLLAGSVMALGLFISSLTDSTLIAAVATFGLILLLWVIDAAAGQEENWIAATLRHVSLLQQYSNWVQGILSSSSLILFLS IIVLGLFATVQSVESLRWQQS >Mature_261_residues MNGVVAIFRKELRGYFTSPIAYVVAAVFWGLAGFFFFNILVRVISFSQQVDLFAQFGQENNFDAATILSQQFLNLLGTLS LFLLPIFTMSSYAEERRRGTMELLATSPITNLEVALGKWLAVWVFFITLLLPPLVYHVLVLSSANPAVDYRLTLMGYVGL TLLAGSVMALGLFISSLTDSTLIAAVATFGLILLLWVIDAAAGQEENWIAATLRHVSLLQQYSNWVQGILSSSSLILFLS IIVLGLFATVQSVESLRWQQS
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28817; Mature: 28817
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGVVAIFRKELRGYFTSPIAYVVAAVFWGLAGFFFFNILVRVISFSQQVDLFAQFGQEN CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NFDAATILSQQFLNLLGTLSLFLLPIFTMSSYAEERRRGTMELLATSPITNLEVALGKWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH AVWVFFITLLLPPLVYHVLVLSSANPAVDYRLTLMGYVGLTLLAGSVMALGLFISSLTDS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLIAAVATFGLILLLWVIDAAAGQEENWIAATLRHVSLLQQYSNWVQGILSSSSLILFLS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIVLGLFATVQSVESLRWQQS HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGVVAIFRKELRGYFTSPIAYVVAAVFWGLAGFFFFNILVRVISFSQQVDLFAQFGQEN CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NFDAATILSQQFLNLLGTLSLFLLPIFTMSSYAEERRRGTMELLATSPITNLEVALGKWL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHH AVWVFFITLLLPPLVYHVLVLSSANPAVDYRLTLMGYVGLTLLAGSVMALGLFISSLTDS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLIAAVATFGLILLLWVIDAAAGQEENWIAATLRHVSLLQQYSNWVQGILSSSSLILFLS HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IIVLGLFATVQSVESLRWQQS HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA