| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is prs [H]
Identifier: 86609112
GI number: 86609112
Start: 1729152
End: 1730150
Strand: Direct
Name: prs [H]
Synonym: CYB_1652
Alternate gene names: 86609112
Gene position: 1729152-1730150 (Clockwise)
Preceding gene: 86609106
Following gene: 86609113
Centisome position: 56.76
GC content: 58.46
Gene sequence:
>999_bases GTGGTTCGCCCTGCCCCTCTTCTCCGCCCTTCTCCCCTGCCACCCATCTCGGATAGCAACCGCCTCAAAATCTTCTCAGG CAGCGCCAACCCGGCTCTGGCTCAGGAGGTAGCGCGTTACCTGGGCATGGATCTGGGCCCGATGTTGCGCAAGCGCTTTG CCGATGGCGAGCTGTACATCCAAATCCAAGAGTCGATCCGGGGTGCCGATGTCTACTTGGTGCAGCCCACCTGCCGCCCC GTCAACGACCACCTAATGGAACTGCTGGTCATTATTGACGCCTGTCGCCGCGCCTCTGCCCGGCAGATCACCGCTGTCTT GCCCTACTACGGCTACGCTCGCGCCGACCGCAAAACGGCAGGCCGAGAAGCGATCACCGCCAAGCTGGTGGCCAACATGA TTACCCAGGCGGGAGCTCATCGCGTGCTGGCTATGGATCTGCACTCGGCCCAGATTCAAGGCTACTTCGACATTCCCCTC GACCATGTCTACGCCCAGCCGGTATTACAGGCTTACCTCAAGGAAAAGGGCTTGCTCGACGAAGACATTGTGGTCGTCTC TCCCGATGTGGGGGGCGTGGCTCGTGCCCGTGCCTTTGCCAAAAAACTCAAGGAAGCCCCTCTGGCAATCATTGACAAGC GCCGCCAAGCCCACAACGATGTGGAAGTCATGAATCTGATTGGGGATGTGCGGGGGAAAACTGCCATCCTTGTGGATGAC ATGATCGATACCGCAGGCACCATCTCGGAAGGGGCAAAATTGCTGCGCAAGCTGGGAGCCAAAGCGGTTTATGCCTGCGC CATTCATCCTGTTTTTTCTGAGCCGGCCATTCAACGCCTGCGGGGTGGCCTGTTTGAAGAGGTGATCGTCACCAACACCA TCCCTATCCCTCCAGAGCAGCACTTTCCCGAGTTAACCGTTCTCTCGGTAGCCAATGTGCTGGGGGAAGCGATCTGGCGC ATCCATGAAGATAGCTCCGTCAGCAGCATGTTTCACTAA
Upstream 100 bases:
>100_bases AAATCCCCAAGAATACAGTTGCTGAGGTTGCAAGTGCTGGTGCTACGATAGCGACAGCTCGCCGTTAGGCGTTGGCTACG GACGAGTTCAGCATCGATCT
Downstream 100 bases:
>100_bases AGTAAGTTTCAAAGTAAGTTTCTCCAGAGTATCGCTAGAGTAGAGTGGGTGCAGAATGGGTGCGCCTGCTCCTTTTCCCT GTGGAGATCAGCCCAACCAG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MVRPAPLLRPSPLPPISDSNRLKIFSGSANPALAQEVARYLGMDLGPMLRKRFADGELYIQIQESIRGADVYLVQPTCRP VNDHLMELLVIIDACRRASARQITAVLPYYGYARADRKTAGREAITAKLVANMITQAGAHRVLAMDLHSAQIQGYFDIPL DHVYAQPVLQAYLKEKGLLDEDIVVVSPDVGGVARARAFAKKLKEAPLAIIDKRRQAHNDVEVMNLIGDVRGKTAILVDD MIDTAGTISEGAKLLRKLGAKAVYACAIHPVFSEPAIQRLRGGLFEEVIVTNTIPIPPEQHFPELTVLSVANVLGEAIWR IHEDSSVSSMFH
Sequences:
>Translated_332_residues MVRPAPLLRPSPLPPISDSNRLKIFSGSANPALAQEVARYLGMDLGPMLRKRFADGELYIQIQESIRGADVYLVQPTCRP VNDHLMELLVIIDACRRASARQITAVLPYYGYARADRKTAGREAITAKLVANMITQAGAHRVLAMDLHSAQIQGYFDIPL DHVYAQPVLQAYLKEKGLLDEDIVVVSPDVGGVARARAFAKKLKEAPLAIIDKRRQAHNDVEVMNLIGDVRGKTAILVDD MIDTAGTISEGAKLLRKLGAKAVYACAIHPVFSEPAIQRLRGGLFEEVIVTNTIPIPPEQHFPELTVLSVANVLGEAIWR IHEDSSVSSMFH >Mature_332_residues MVRPAPLLRPSPLPPISDSNRLKIFSGSANPALAQEVARYLGMDLGPMLRKRFADGELYIQIQESIRGADVYLVQPTCRP VNDHLMELLVIIDACRRASARQITAVLPYYGYARADRKTAGREAITAKLVANMITQAGAHRVLAMDLHSAQIQGYFDIPL DHVYAQPVLQAYLKEKGLLDEDIVVVSPDVGGVARARAFAKKLKEAPLAIIDKRRQAHNDVEVMNLIGDVRGKTAILVDD MIDTAGTISEGAKLLRKLGAKAVYACAIHPVFSEPAIQRLRGGLFEEVIVTNTIPIPPEQHFPELTVLSVANVLGEAIWR IHEDSSVSSMFH
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=312, Percent_Identity=46.474358974359, Blast_Score=295, Evalue=3e-80, Organism=Homo sapiens, GI4506129, Length=309, Percent_Identity=45.9546925566343, Blast_Score=291, Evalue=4e-79, Organism=Homo sapiens, GI28557709, Length=312, Percent_Identity=45.8333333333333, Blast_Score=290, Evalue=1e-78, Organism=Homo sapiens, GI84875539, Length=312, Percent_Identity=45.5128205128205, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI4506133, Length=344, Percent_Identity=31.9767441860465, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI194018537, Length=342, Percent_Identity=31.2865497076023, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI310128524, Length=144, Percent_Identity=34.0277777777778, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI310115209, Length=144, Percent_Identity=34.0277777777778, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI310118259, Length=144, Percent_Identity=34.0277777777778, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI310119946, Length=144, Percent_Identity=34.0277777777778, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=48.8817891373802, Blast_Score=315, Evalue=4e-87, Organism=Caenorhabditis elegans, GI25149168, Length=312, Percent_Identity=44.2307692307692, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17554702, Length=312, Percent_Identity=44.2307692307692, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI71989924, Length=312, Percent_Identity=44.2307692307692, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17554704, Length=309, Percent_Identity=44.336569579288, Blast_Score=273, Evalue=7e-74, Organism=Caenorhabditis elegans, GI17570245, Length=340, Percent_Identity=30.2941176470588, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319403, Length=314, Percent_Identity=41.0828025477707, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6321776, Length=315, Percent_Identity=41.2698412698413, Blast_Score=244, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6320946, Length=315, Percent_Identity=39.6825396825397, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6322667, Length=205, Percent_Identity=40.9756097560976, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=39.4736842105263, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI21355239, Length=314, Percent_Identity=46.1783439490446, Blast_Score=288, Evalue=4e-78, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=43.5820895522388, Blast_Score=275, Evalue=4e-74, Organism=Drosophila melanogaster, GI281362873, Length=373, Percent_Identity=30.8310991957105, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24651454, Length=373, Percent_Identity=30.8310991957105, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24651458, Length=358, Percent_Identity=30.1675977653631, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24651456, Length=358, Percent_Identity=30.1675977653631, Blast_Score=176, Evalue=2e-44, Organism=Drosophila melanogaster, GI24651462, Length=377, Percent_Identity=28.6472148541114, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24651464, Length=377, Percent_Identity=28.6472148541114, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI45552010, Length=392, Percent_Identity=29.3367346938776, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 36451; Mature: 36451
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPAPLLRPSPLPPISDSNRLKIFSGSANPALAQEVARYLGMDLGPMLRKRFADGELYI CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEE QIQESIRGADVYLVQPTCRPVNDHLMELLVIIDACRRASARQITAVLPYYGYARADRKTA EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC GREAITAKLVANMITQAGAHRVLAMDLHSAQIQGYFDIPLDHVYAQPVLQAYLKEKGLLD CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCC EDIVVVSPDVGGVARARAFAKKLKEAPLAIIDKRRQAHNDVEVMNLIGDVRGKTAILVDD CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEHH MIDTAGTISEGAKLLRKLGAKAVYACAIHPVFSEPAIQRLRGGLFEEVIVTNTIPIPPEQ HHHCCCCHHHHHHHHHHHCCHHEEHHHHCCHHCCHHHHHHHCCHHHHHHHHCCCCCCCCC HFPELTVLSVANVLGEAIWRIHEDSSVSSMFH CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure MVRPAPLLRPSPLPPISDSNRLKIFSGSANPALAQEVARYLGMDLGPMLRKRFADGELYI CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEE QIQESIRGADVYLVQPTCRPVNDHLMELLVIIDACRRASARQITAVLPYYGYARADRKTA EEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHC GREAITAKLVANMITQAGAHRVLAMDLHSAQIQGYFDIPLDHVYAQPVLQAYLKEKGLLD CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHCCEEECCCHHHHHHHHHHHHHHHHCCCCC EDIVVVSPDVGGVARARAFAKKLKEAPLAIIDKRRQAHNDVEVMNLIGDVRGKTAILVDD CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEHH MIDTAGTISEGAKLLRKLGAKAVYACAIHPVFSEPAIQRLRGGLFEEVIVTNTIPIPPEQ HHHCCCCHHHHHHHHHHHCCHHEEHHHHCCHHCCHHHHHHHCCHHHHHHHHCCCCCCCCC HFPELTVLSVANVLGEAIWRIHEDSSVSSMFH CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]