| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ybbP [H]
Identifier: 86609105
GI number: 86609105
Start: 1717559
End: 1718482
Strand: Direct
Name: ybbP [H]
Synonym: CYB_1645
Alternate gene names: 86609105
Gene position: 1717559-1718482 (Clockwise)
Preceding gene: 86609104
Following gene: 86609106
Centisome position: 56.37
GC content: 58.12
Gene sequence:
>924_bases ATGCTGGCGGCCTTATGGGCTTGGCTACAGCAGTTTAACTTTCTCAGCCTCTTGGACTGGGCTCTGGCTGTCTTTCTGTT GGCTTTGGCTCTCTACTACACCCGCGAAAGTCGTGCTGGGGTGCTGGTGAGGGGATTTATAGTGCTGCTGGTGCTGTACC TGGCCACAGCCTCTCTCCCCTTGGTTCACCTGATCTTGGATCGCCTGCTCCTGGGCGCAGCTGTAGCCATGGGCGTGCTC TTTCAACCGGAGTTTCGCCGGCTGCTGGAGCAGTTGGCAAGAGCCATCCGCATGGAGTGGCCGAGCAACGCAGGCGATGA CGAGGAGGATCCTGAGGAAGATTTGGTGGAAGAACTGGTGCAAGCAGTGCGAGAACTTTCCCAAAACCGCACAGGAGCGC TGATTGTGATTGAGCCGGAGCAACCAATTGACTCGCGGGTGTTTACCGACAAAGGAGTACCTCTCCAGGCGCGGGTGTCG CGGGAGATCTTGCAGACCATTTTCCAGACTTCAACTTTGTTGCATGATGGGGCTGTGGTCATCCATCGGAATCGCATTCG CGCAGCGGGGGTCATCCTGCCGGTTTCGGAGCGGGCCGCCTCCCGACAGCTGGGCACACGGCACCGCGCTGCGATGGGGA TCACAGAGCAGACCAATTGCTTGTGTATTGTGGTCTCAGAAGAAACGGGATCCATTTCCCTGGCGGAGGGTGGGCGCATC GAGCGGCCTCTGACCAGTGCCAAGTTACACGAACTGCTGGTACAGCGGTTGCGCAATCCCCGCGATGCCAAAAAACGAGA TGCTCCGCTAAAGGGATTGTGGGCCCACCCCTGGTTTCGCAATGGGCCGCTGCGCTGGTGGGGATCCCTTGCCGATCTGA CTAAACTCTTTCGCAAACCTGAGAAAACCCTCCCGAAAGACTGA
Upstream 100 bases:
>100_bases AGGCTGGTCTGGGGGCCGCAGTCCAACAGGGGTTCTGAGGTGCAGAACGGCACCAGGCAGAAGGTCCGCAATGAGGGGAG CGTGAACGGGGTTTTTCGCC
Downstream 100 bases:
>100_bases TCCCCATGACCCTTTCTCCTGCCCATCTTCTGCAGTTGCCTGCCGACCTAGATCCGCAGTTGTTGCCCCGCCATGTGGCG GTGGTGATGGATGGCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD
Sequences:
>Translated_307_residues MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD >Mature_307_residues MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLPLVHLILDRLLLGAAVAMGVL FQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELVQAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVS REILQTIFQTSTLLHDGAVVIHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKPEKTLPKD
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 34580; Mature: 34580
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLP CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVHLILDRLLLGAAVAMGVLFQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH QAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVSREILQTIFQTSTLLHDGAVV HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE IHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI EECCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCC ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKP CCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC EKTLPKD CCCCCCC >Mature Secondary Structure MLAALWAWLQQFNFLSLLDWALAVFLLALALYYTRESRAGVLVRGFIVLLVLYLATASLP CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LVHLILDRLLLGAAVAMGVLFQPEFRRLLEQLARAIRMEWPSNAGDDEEDPEEDLVEELV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH QAVRELSQNRTGALIVIEPEQPIDSRVFTDKGVPLQARVSREILQTIFQTSTLLHDGAVV HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE IHRNRIRAAGVILPVSERAASRQLGTRHRAAMGITEQTNCLCIVVSEETGSISLAEGGRI EECCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECCCCCC ERPLTSAKLHELLVQRLRNPRDAKKRDAPLKGLWAHPWFRNGPLRWWGSLADLTKLFRKP CCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC EKTLPKD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]