| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86609037
Identifier: 86609037
GI number: 86609037
Start: 1645372
End: 1646922
Strand: Direct
Name: 86609037
Synonym: CYB_1572
Alternate gene names: NA
Gene position: 1645372-1646922 (Clockwise)
Preceding gene: 86609033
Following gene: 86609038
Centisome position: 54.01
GC content: 66.41
Gene sequence:
>1551_bases GTGCTGGGTGGAGTTTTGGCGATTGCGGCCGCGATTGGCTTGGTGGTCTTGCTGTTGGAAGCGATTCGATATCGCCGCTG GGGATCCGTTCGCCGCTGGCAACCGGCAGTGGGGCTGGGCTTGGTGGCCTTGGCGGCGCTGGGGTGCTGGCTGGGTCAGT TGCCGGATCTGATCCCCCTGGCTTTGTTGTTGGGGGGCCTGGTGGGGGTGGGTTTACTGGGGTTGAGTGGCTGCGGTCGG GCCGGGCAAGGGCTGGTGGTGCTGTTGCTCAGTTTGGCGGCCTGGCAAAGTCTGGCTATCGGCTCCCCCAGTCGCATCGG CATTGCGGAGCAGCATGGAATGCTGTTTCTGTGGGGCTGCGGCCTGGGGATGGGCTTGGTGGGGATCCCTTTGCTGGGGG TCTTGGCCGCAGCGGAAGCCCTGTCGTTGCTGATGGCGCTGGGCCAGGGGTGGAGCGGCATTGCCGCCATAACCTGGGGA TCTCGCCTGCTGGAGATGGGATCCCAGCCGGATCTCCCTTGGCAGGTGCTGTTGCCGGTGGGGCTGGCCGCCCTCAGCTT GGTGGCAGGCACTGTGCCGCTCTTGACCGCCTCAGAAGACTCCCCCGGGCTGCTGTCGGCAGTGGGGCATGGGGTGGGGT GGCTGGTGGCGTTGGCGCTGGCCTTGGCCTTGACCCGCAACGGCCTATACCAGGATCCCTTTTGGGCCTTGCTCTACGGG GCAGGGGTGCTGCTCTCGTGGGCCTTGCTTGCCTTGGAAAACCAGACGGGACAGGGGATCCCTGCGCCAGGGGAACCTGC TGGCGTCAGCGGGCCGGAGGCTTCAGCCGGTCGCGTCAGCGTTGCCGAGCAACAAGGACGGCTGCTCTGGCGGGCCTGTG TGGGCCTAACGCTGGTGGGCGGAGGAGCGCTGCTGGCGTTGCGGCTGGGGGGATCCTACGGGGCGGCCCTCTTGGGGCTG GGATGTCTGGCTTTTCCCAGCCGTTGGGGGGCCATGGCCGCTTTGTTTTTGTCGGCCCGCCCTCTGCTGCAAAACCTGTT GCACCAGTTCAACCTGCAGGTTGCCGGGATCGACCTCACCCAACCCTATGTGTCGGCGGCGCTGTACCTGGGAATGGCGG CCATGGCGCTGGCGGCGCTCATTCACTGGCTATACGGGCCAGACAAACCCCTGCAGACGGGGATCGCCCTGACGCTGGCT AGCCTGGCTTTGCCGGTGGGGGTGGGCTACTTCATTCACGCTCAGCCGCAAGCGGCCTTCCTGTTGGGAGCCTTGACCAC CGCCTTGATCCTGGCGGCGCTGCAGCCCATCCTCCTGCAGCAGGAGGGAAGAGGGGCGGAATCTCTGGGGATCCGAGGTT TGGGCCTGGCTGTGCTTGCCATTCTGGGATCCAACCTCAGCCGCGATTGGACGGTAACCGGCTTCCATGCCACCCGCTGG GAACGGGCGCTGGTGCTGGCCGGGGTGGTCGGGATCCTGGCGTTGATTCTCCTGCTCTGGCAAGGCTGGAGCCTGTGGCA CTCTGGGAGAATGCGCGCCCCCGCCCGCTGA
Upstream 100 bases:
>100_bases CTGATGCTAGGCAACGCTTCCGCTCGATTGGTTCTGAATGGCGATGATGACCGGACAGCGATAGGCGATAGTTGGTGCAG GGCTTGAAAGGAGGGAGCAC
Downstream 100 bases:
>100_bases TGAAACCTGTTCCCCTGGGCACCCTCGGCACCTGGCAGGGGATCCTCGGCCCGGAACAAACCGCTGAGGCTCTGGGCAAC CCCGGTGTGAAGGTGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR
Sequences:
>Translated_516_residues MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR >Mature_516_residues MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53114; Mature: 53114
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ALLLGGLVGVGLLGLSGCGRAGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGC HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEC GLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWGSRLLEMGSQPDLPWQVLLPV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHH GLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEC GGALLALRLGGSYGAALLGLGCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLT CCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC QPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLASLALPVGVGYFIHAQPQAAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH LLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCEEECCCHHHH ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC >Mature Secondary Structure MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ALLLGGLVGVGLLGLSGCGRAGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGC HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEC GLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWGSRLLEMGSQPDLPWQVLLPV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHH GLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEC GGALLALRLGGSYGAALLGLGCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLT CCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC QPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLASLALPVGVGYFIHAQPQAAF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH LLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCEEECCCHHHH ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA