Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86609037

Identifier: 86609037

GI number: 86609037

Start: 1645372

End: 1646922

Strand: Direct

Name: 86609037

Synonym: CYB_1572

Alternate gene names: NA

Gene position: 1645372-1646922 (Clockwise)

Preceding gene: 86609033

Following gene: 86609038

Centisome position: 54.01

GC content: 66.41

Gene sequence:

>1551_bases
GTGCTGGGTGGAGTTTTGGCGATTGCGGCCGCGATTGGCTTGGTGGTCTTGCTGTTGGAAGCGATTCGATATCGCCGCTG
GGGATCCGTTCGCCGCTGGCAACCGGCAGTGGGGCTGGGCTTGGTGGCCTTGGCGGCGCTGGGGTGCTGGCTGGGTCAGT
TGCCGGATCTGATCCCCCTGGCTTTGTTGTTGGGGGGCCTGGTGGGGGTGGGTTTACTGGGGTTGAGTGGCTGCGGTCGG
GCCGGGCAAGGGCTGGTGGTGCTGTTGCTCAGTTTGGCGGCCTGGCAAAGTCTGGCTATCGGCTCCCCCAGTCGCATCGG
CATTGCGGAGCAGCATGGAATGCTGTTTCTGTGGGGCTGCGGCCTGGGGATGGGCTTGGTGGGGATCCCTTTGCTGGGGG
TCTTGGCCGCAGCGGAAGCCCTGTCGTTGCTGATGGCGCTGGGCCAGGGGTGGAGCGGCATTGCCGCCATAACCTGGGGA
TCTCGCCTGCTGGAGATGGGATCCCAGCCGGATCTCCCTTGGCAGGTGCTGTTGCCGGTGGGGCTGGCCGCCCTCAGCTT
GGTGGCAGGCACTGTGCCGCTCTTGACCGCCTCAGAAGACTCCCCCGGGCTGCTGTCGGCAGTGGGGCATGGGGTGGGGT
GGCTGGTGGCGTTGGCGCTGGCCTTGGCCTTGACCCGCAACGGCCTATACCAGGATCCCTTTTGGGCCTTGCTCTACGGG
GCAGGGGTGCTGCTCTCGTGGGCCTTGCTTGCCTTGGAAAACCAGACGGGACAGGGGATCCCTGCGCCAGGGGAACCTGC
TGGCGTCAGCGGGCCGGAGGCTTCAGCCGGTCGCGTCAGCGTTGCCGAGCAACAAGGACGGCTGCTCTGGCGGGCCTGTG
TGGGCCTAACGCTGGTGGGCGGAGGAGCGCTGCTGGCGTTGCGGCTGGGGGGATCCTACGGGGCGGCCCTCTTGGGGCTG
GGATGTCTGGCTTTTCCCAGCCGTTGGGGGGCCATGGCCGCTTTGTTTTTGTCGGCCCGCCCTCTGCTGCAAAACCTGTT
GCACCAGTTCAACCTGCAGGTTGCCGGGATCGACCTCACCCAACCCTATGTGTCGGCGGCGCTGTACCTGGGAATGGCGG
CCATGGCGCTGGCGGCGCTCATTCACTGGCTATACGGGCCAGACAAACCCCTGCAGACGGGGATCGCCCTGACGCTGGCT
AGCCTGGCTTTGCCGGTGGGGGTGGGCTACTTCATTCACGCTCAGCCGCAAGCGGCCTTCCTGTTGGGAGCCTTGACCAC
CGCCTTGATCCTGGCGGCGCTGCAGCCCATCCTCCTGCAGCAGGAGGGAAGAGGGGCGGAATCTCTGGGGATCCGAGGTT
TGGGCCTGGCTGTGCTTGCCATTCTGGGATCCAACCTCAGCCGCGATTGGACGGTAACCGGCTTCCATGCCACCCGCTGG
GAACGGGCGCTGGTGCTGGCCGGGGTGGTCGGGATCCTGGCGTTGATTCTCCTGCTCTGGCAAGGCTGGAGCCTGTGGCA
CTCTGGGAGAATGCGCGCCCCCGCCCGCTGA

Upstream 100 bases:

>100_bases
CTGATGCTAGGCAACGCTTCCGCTCGATTGGTTCTGAATGGCGATGATGACCGGACAGCGATAGGCGATAGTTGGTGCAG
GGCTTGAAAGGAGGGAGCAC

Downstream 100 bases:

>100_bases
TGAAACCTGTTCCCCTGGGCACCCTCGGCACCTGGCAGGGGATCCTCGGCCCGGAACAAACCGCTGAGGCTCTGGGCAAC
CCCGGTGTGAAGGTGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR
AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG
SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG
AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL
GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA
SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW
ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR

Sequences:

>Translated_516_residues
MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR
AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG
SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG
AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL
GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA
SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW
ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR
>Mature_516_residues
MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPLALLLGGLVGVGLLGLSGCGR
AGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGCGLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWG
SRLLEMGSQPDLPWQVLLPVGLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG
AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVGGGALLALRLGGSYGAALLGL
GCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLTQPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLA
SLALPVGVGYFIHAQPQAAFLLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW
ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53114; Mature: 53114

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
ALLLGGLVGVGLLGLSGCGRAGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEC
GLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWGSRLLEMGSQPDLPWQVLLPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHH
GLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG
HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEC
GGALLALRLGGSYGAALLGLGCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLT
CCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
QPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLASLALPVGVGYFIHAQPQAAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
LLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCEEECCCHHHH
ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MLGGVLAIAAAIGLVVLLLEAIRYRRWGSVRRWQPAVGLGLVALAALGCWLGQLPDLIPL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
ALLLGGLVGVGLLGLSGCGRAGQGLVVLLLSLAAWQSLAIGSPSRIGIAEQHGMLFLWGC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEC
GLGMGLVGIPLLGVLAAAEALSLLMALGQGWSGIAAITWGSRLLEMGSQPDLPWQVLLPV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHH
GLAALSLVAGTVPLLTASEDSPGLLSAVGHGVGWLVALALALALTRNGLYQDPFWALLYG
HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AGVLLSWALLALENQTGQGIPAPGEPAGVSGPEASAGRVSVAEQQGRLLWRACVGLTLVG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEC
GGALLALRLGGSYGAALLGLGCLAFPSRWGAMAALFLSARPLLQNLLHQFNLQVAGIDLT
CCEEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
QPYVSAALYLGMAAMALAALIHWLYGPDKPLQTGIALTLASLALPVGVGYFIHAQPQAAF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHH
LLGALTTALILAALQPILLQQEGRGAESLGIRGLGLAVLAILGSNLSRDWTVTGFHATRW
HHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHCCCCCCCCEEECCCHHHH
ERALVLAGVVGILALILLLWQGWSLWHSGRMRAPAR
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA