Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608953

Identifier: 86608953

GI number: 86608953

Start: 1562119

End: 1562664

Strand: Direct

Name: 86608953

Synonym: CYB_1486

Alternate gene names: NA

Gene position: 1562119-1562664 (Clockwise)

Preceding gene: 86608952

Following gene: 86608954

Centisome position: 51.27

GC content: 49.82

Gene sequence:

>546_bases
ATGGGAAATATCTTGCGAATTGTTGTAACAGGGCCGGTGGGAGCTGGAAAGTCTACCTTTATTCGCACGATTAGCGAGAT
TGAGGTAGTAGACACCGATTGCAAAGCAACGGACGAGGTGGCAGAGCTGAAGAAAACCACGACGGTAAGCATGGACTTCG
GCCGCTTGAGAATTGGAGAGGATGAAGAAGAGATGTGGCTGCATCTCTACGGTACTCCCGGCCAGTCTCGCTTTAACTTT
ATGTGGGATATTTTAATTAAGCGCGCCCACGGCTATGTTCTTCTGGTGCCCGCGCACCTGCCGGGTCAATTTCGCAATGC
CCAAGCCATTCAATCTTTTATGAAGGTGAGAACAAGTGCCCCCTGCGTGATTGGGATCACCCACGTCGATCAACCCAATG
CCTGGGATCCAGAAGACATTTTGTTAATTTTGGGGAATCAAGATGGCGCGATTCCCCACACCACTTTGAATGCTCAAGAG
CCATCTTCTGTTGCCAACACGTTGCTTCTGTTGGTTGAGCAAATGATGCCCCAGGTGGTTGTTTGA

Upstream 100 bases:

>100_bases
GAAGCAACCTGGAGATAGCTTTACCTCCCGTGCGGCACATCGGTGCACTCCCCCGAGTTTTATTCAGCTTTGTCGCTAGA
GCTTAGTCTGAGGCCAGTTT

Downstream 100 bases:

>100_bases
ACAGATTTTCAGGTATCCAGCAGGCTACAGCTTTTTTTAGCAACATCGACCCCAGCCAACACAGGCGTATCTTTTGCGTG
ACAGGGATCCCTCCCGTGAA

Product: small GTP-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MGNILRIVVTGPVGAGKSTFIRTISEIEVVDTDCKATDEVAELKKTTTVSMDFGRLRIGEDEEEMWLHLYGTPGQSRFNF
MWDILIKRAHGYVLLVPAHLPGQFRNAQAIQSFMKVRTSAPCVIGITHVDQPNAWDPEDILLILGNQDGAIPHTTLNAQE
PSSVANTLLLLVEQMMPQVVV

Sequences:

>Translated_181_residues
MGNILRIVVTGPVGAGKSTFIRTISEIEVVDTDCKATDEVAELKKTTTVSMDFGRLRIGEDEEEMWLHLYGTPGQSRFNF
MWDILIKRAHGYVLLVPAHLPGQFRNAQAIQSFMKVRTSAPCVIGITHVDQPNAWDPEDILLILGNQDGAIPHTTLNAQE
PSSVANTLLLLVEQMMPQVVV
>Mature_180_residues
GNILRIVVTGPVGAGKSTFIRTISEIEVVDTDCKATDEVAELKKTTTVSMDFGRLRIGEDEEEMWLHLYGTPGQSRFNFM
WDILIKRAHGYVLLVPAHLPGQFRNAQAIQSFMKVRTSAPCVIGITHVDQPNAWDPEDILLILGNQDGAIPHTTLNAQEP
SSVANTLLLLVEQMMPQVVV

Specific function: Unknown

COG id: COG2229

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20009; Mature: 19878

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNILRIVVTGPVGAGKSTFIRTISEIEVVDTDCKATDEVAELKKTTTVSMDFGRLRIGE
CCCEEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHEEEEECCCEEECCC
DEEEMWLHLYGTPGQSRFNFMWDILIKRAHGYVLLVPAHLPGQFRNAQAIQSFMKVRTSA
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
PCVIGITHVDQPNAWDPEDILLILGNQDGAIPHTTLNAQEPSSVANTLLLLVEQMMPQVV
CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
GNILRIVVTGPVGAGKSTFIRTISEIEVVDTDCKATDEVAELKKTTTVSMDFGRLRIGE
CCEEEEEEECCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHEEEEECCCEEECCC
DEEEMWLHLYGTPGQSRFNFMWDILIKRAHGYVLLVPAHLPGQFRNAQAIQSFMKVRTSA
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCC
PCVIGITHVDQPNAWDPEDILLILGNQDGAIPHTTLNAQEPSSVANTLLLLVEQMMPQVV
CEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA