Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608951

Identifier: 86608951

GI number: 86608951

Start: 1560912

End: 1561280

Strand: Direct

Name: 86608951

Synonym: CYB_1484

Alternate gene names: NA

Gene position: 1560912-1561280 (Clockwise)

Preceding gene: 86608950

Following gene: 86608952

Centisome position: 51.23

GC content: 52.85

Gene sequence:

>369_bases
ATGGCTAATCTGTCCTCTTTGCAGGCGATCCTCCAGAGCTATGTTGCCAACACACCGGAAGTCCAGGGAGCAGCAGTGGT
CACCCCCGACGGGCTACCTTTAGCTTCCACACTGCCTGTGGGTATGGATGAAGAGAGAACCTCTGCTATGTCGGCTGCCA
TGCTTTCTTTGGGCGAACGGATTGGGAGAGAGCTAGGGCGCGGAGCCATAGAGAGAGTTTTTGTACAGGGGGAAAAAGGA
TACGGGGTTTTAACCAGTTGTGGCCCCGATGCCGTCTTGCTGACAATTGCCAGTCATGAAGTCAAGCAGGGCTTGCTTTT
TTTGGAAATTAAGCGAGTCGCGGCAAGCATTGCAGAGGCAATGAAGTAA

Upstream 100 bases:

>100_bases
AGGGCATGCGCGAAAAATAAAAGCATAGGGATATTTGCAGTCATGTTTTCGGTTTTCGGGTAGAAACATTAGAAATAGTG
AATCAGCAGGGAGATGTAGG

Downstream 100 bases:

>100_bases
GAAAATCAAATGTGGAGGCTAAGTTTTTGATTCTGTCCTGACGTTGAGGGAAGTATGGCCATTAAACCTTCTGAGCTGCT
CCAAGTCCTGATCTCACGCA

Product: roadblock/LC7 domain-contain protein

Products: NA

Alternate protein names: Roadblock/LC7 Domain Superfamily; Roadblock/LC7 Domain-Contain Protein; Carboxy- Peptidase; Roadblock/LC7 Domain Protein; Roadblock/LC7 Domain Family

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MANLSSLQAILQSYVANTPEVQGAAVVTPDGLPLASTLPVGMDEERTSAMSAAMLSLGERIGRELGRGAIERVFVQGEKG
YGVLTSCGPDAVLLTIASHEVKQGLLFLEIKRVAASIAEAMK

Sequences:

>Translated_122_residues
MANLSSLQAILQSYVANTPEVQGAAVVTPDGLPLASTLPVGMDEERTSAMSAAMLSLGERIGRELGRGAIERVFVQGEKG
YGVLTSCGPDAVLLTIASHEVKQGLLFLEIKRVAASIAEAMK
>Mature_121_residues
ANLSSLQAILQSYVANTPEVQGAAVVTPDGLPLASTLPVGMDEERTSAMSAAMLSLGERIGRELGRGAIERVFVQGEKGY
GVLTSCGPDAVLLTIASHEVKQGLLFLEIKRVAASIAEAMK

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12742; Mature: 12611

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLSSLQAILQSYVANTPEVQGAAVVTPDGLPLASTLPVGMDEERTSAMSAAMLSLGER
CCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGRELGRGAIERVFVQGEKGYGVLTSCGPDAVLLTIASHEVKQGLLFLEIKRVAASIAEA
HHHHHCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MK
CC
>Mature Secondary Structure 
ANLSSLQAILQSYVANTPEVQGAAVVTPDGLPLASTLPVGMDEERTSAMSAAMLSLGER
CCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGRELGRGAIERVFVQGEKGYGVLTSCGPDAVLLTIASHEVKQGLLFLEIKRVAASIAEA
HHHHHCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA