Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608950

Identifier: 86608950

GI number: 86608950

Start: 1559947

End: 1560831

Strand: Direct

Name: 86608950

Synonym: CYB_1483

Alternate gene names: NA

Gene position: 1559947-1560831 (Clockwise)

Preceding gene: 86608949

Following gene: 86608951

Centisome position: 51.2

GC content: 59.66

Gene sequence:

>885_bases
ATGGCCATAGTTGGAGACCTCCAAGAATTTTCCTTGCCTGATTTGTTGCAGCTGATCGAGAGAGGCAGCAAAACAGGACA
GCTCTGTATTTGGGCGCCCAGAGGTATCTACAGGATCTGGTTTTACCAAGGTCGGGTCATTGCTGCCCTACCACCTCAGG
AAGAACACCGCCTGGAGAGCCTGCTGGCCCACTCTGGCTTGGTGAGCGAGCGGGTAGTCGAGAAGCTGGCTTCCTTTTGC
GGCTCGGAAGAGCCTCTGGGGCGTTGCTTGCAGCGGCAAGGGTTGATTACCCCAGCAGCCCTGGCCAAGCTCTTCCGCCA
TCAACTGCAAACCGGCCTCTACAGCCTCTTTGCCCTCGAATCCGGCCAGTTCAGCTTCCTGCCCAACGTGCCCATGCCCT
ACCGAGAAATGACTGGCCTCAGCAAAAGCGCTACCGCTGCCGTCCTGGAAGCCCTGCAGCAGCTCAAGCTAGAGCAGCAG
CCCGAAAAAGACCTGCCAGAGCCCGATAGCTGCTTTTGGCGTACCAGCACCGAACTGCCTCTGTTCAAACTTTCTGCGCT
GGAGTGGGGGATCCTGGAGCAGGTGTCGCCTTCTCGCAAGCTGACGGCTTTGGCTCAAGCCCTGGGGGCCGACTTGTTGG
AGGTGCGCTATGCCTGCGCCCGTCTGGCCAAGCTGGGGTTGATCAGCCCCTGTGAGGGGCCAACGGTTCTGGCTCGGTCT
GGTCACTTGGAGCTGTCCAAGTCGATTGCTGAGGAGGTGAATCCCGAGCCGGTGAGGGAGAGGCTGGGGGCAAGGGTGCC
TGGTCTCCAGGATGAGGGCGGCCCCGTCAAGCCTTCTCTGGTCAGTCGATTAGCCACCCTCCTCAAGGGCATGCGCGAAA
AATAA

Upstream 100 bases:

>100_bases
TTGTCCGAGAGTACATGTACAAGAATAGGGATGTCCAAAAAATCACTGAAGCATTGATTTTTCACCCATTCCATCGAAGC
GAGGTTCATAGAGAGTTCTT

Downstream 100 bases:

>100_bases
AAGCATAGGGATATTTGCAGTCATGTTTTCGGTTTTCGGGTAGAAACATTAGAAATAGTGAATCAGCAGGGAGATGTAGG
ATGGCTAATCTGTCCTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MAIVGDLQEFSLPDLLQLIERGSKTGQLCIWAPRGIYRIWFYQGRVIAALPPQEEHRLESLLAHSGLVSERVVEKLASFC
GSEEPLGRCLQRQGLITPAALAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQQ
PEKDLPEPDSCFWRTSTELPLFKLSALEWGILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARS
GHLELSKSIAEEVNPEPVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK

Sequences:

>Translated_294_residues
MAIVGDLQEFSLPDLLQLIERGSKTGQLCIWAPRGIYRIWFYQGRVIAALPPQEEHRLESLLAHSGLVSERVVEKLASFC
GSEEPLGRCLQRQGLITPAALAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQQ
PEKDLPEPDSCFWRTSTELPLFKLSALEWGILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARS
GHLELSKSIAEEVNPEPVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
>Mature_293_residues
AIVGDLQEFSLPDLLQLIERGSKTGQLCIWAPRGIYRIWFYQGRVIAALPPQEEHRLESLLAHSGLVSERVVEKLASFCG
SEEPLGRCLQRQGLITPAALAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQQP
EKDLPEPDSCFWRTSTELPLFKLSALEWGILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSG
HLELSKSIAEEVNPEPVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32402; Mature: 32271

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVGDLQEFSLPDLLQLIERGSKTGQLCIWAPRGIYRIWFYQGRVIAALPPQEEHRLES
CCCCCCHHHCCHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCEEEEECCCCHHHHHHH
LLAHSGLVSERVVEKLASFCGSEEPLGRCLQRQGLITPAALAKLFRHQLQTGLYSLFALE
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQQPEKDLPEPDSCFWRTSTELP
CCCEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
LFKLSALEWGILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
GHLELSKSIAEEVNPEPVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIVGDLQEFSLPDLLQLIERGSKTGQLCIWAPRGIYRIWFYQGRVIAALPPQEEHRLES
CCCCCHHHCCHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCEEEEECCCCHHHHHHH
LLAHSGLVSERVVEKLASFCGSEEPLGRCLQRQGLITPAALAKLFRHQLQTGLYSLFALE
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHC
SGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQQPEKDLPEPDSCFWRTSTELP
CCCEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC
LFKLSALEWGILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
GHLELSKSIAEEVNPEPVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
CCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA