Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608949

Identifier: 86608949

GI number: 86608949

Start: 1558659

End: 1559549

Strand: Direct

Name: 86608949

Synonym: CYB_1482

Alternate gene names: NA

Gene position: 1558659-1559549 (Clockwise)

Preceding gene: 86608948

Following gene: 86608950

Centisome position: 51.16

GC content: 59.26

Gene sequence:

>891_bases
ATGGCGATGCTTGGAGATCTTCAGGAATTTTCCTTATGCGACCTGTTGCATTTAATGGAAAAGGGTAAGAAAGCAGGGCA
ATTATCCATCTGGGCACCCAATGGCATTCAGCGGATTTGGTTTTACCAAGGTCGGGTGGTCGCCGCCCTCACCCCTGAAG
AAAAGCATCGTTTGGAAAGCCTGCTGACGCGCTTTGGCTTGGTGGACGAGCAGGTGGTCAGCCAGTTGGTCGCTAGGGGC
TTGGAGGAGCCTCTGGGGCGTTGCCTGCAGCGGCAAGGGTTGATCTCGCCCGTAGATTTGGCCAAGCTCTTTCGCCATCA
ACTGCAAACCGGCCTCTACAGCCTCTTCGCCCTCGAATCCGGCCAGTTCAGCTTCCTGCCCAACGTGCCCATGCCCTACC
GAGAAATGACTGGCCTCAGCAAAAGCGCCACCGCTGCCGTCCTGGAAGCCCTGCAGCAGCTCAAGCTGGAGCAACGCCCC
GAAAAAGACCTGCCCGAACCCGATAGTTGCTTTTGGCGTACCAGCACCGAACTGCCTCTGTTCAAGCTTTCTGCGCTGGA
GTGGTCGATCCTGGAGCAGGTGTCGCCTTCTCGCAAGCTGACGGCTTTGGCTCAAGCCCTGGGGGCAGACCTGCTGGAGG
TGCGCTATGCCTGCGCCCGTCTGGCGAAGCTGGGGTTGATCAGTCCCTGTGAGGGCCCAACGGTTCTGGCTCGGTCTTCT
TCGGCCAGTCGCTTGCAACTGTCCGAGTCGGTGGCTGAGGAAGCAAATCCTGAGCAGGTGAGAGAGAGGCTGGGGGCAAG
GGTGCCTGGTCTCCAGGATGAGGGCGGCCCCGTCAAGCCTTCTCTGGTCAGTCGATTGGCCACCCTCCTCAAGGGCATGC
GCGAAAAGTGA

Upstream 100 bases:

>100_bases
AACCAAGCTGTAAGCGCATCTTCTGGTTTCTTACTTAGCAAAGCAAAAACCGTGAAAATACTGAGAAAGCGCATCTTGCA
GCGGTGAAGGGAGCAAAAGT

Downstream 100 bases:

>100_bases
GGTAAACCTAACGGAAAAAAACAATCTTCTGGCTTTCTTCTGGCTTTGTAAAGAACTTGGAAGGGTCTATAACTTTTCTC
TAACTTCCGCTCACAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MAMLGDLQEFSLCDLLHLMEKGKKAGQLSIWAPNGIQRIWFYQGRVVAALTPEEKHRLESLLTRFGLVDEQVVSQLVARG
LEEPLGRCLQRQGLISPVDLAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQRP
EKDLPEPDSCFWRTSTELPLFKLSALEWSILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSS
SASRLQLSESVAEEANPEQVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK

Sequences:

>Translated_296_residues
MAMLGDLQEFSLCDLLHLMEKGKKAGQLSIWAPNGIQRIWFYQGRVVAALTPEEKHRLESLLTRFGLVDEQVVSQLVARG
LEEPLGRCLQRQGLISPVDLAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQRP
EKDLPEPDSCFWRTSTELPLFKLSALEWSILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSS
SASRLQLSESVAEEANPEQVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
>Mature_295_residues
AMLGDLQEFSLCDLLHLMEKGKKAGQLSIWAPNGIQRIWFYQGRVVAALTPEEKHRLESLLTRFGLVDEQVVSQLVARGL
EEPLGRCLQRQGLISPVDLAKLFRHQLQTGLYSLFALESGQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQRPE
KDLPEPDSCFWRTSTELPLFKLSALEWSILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSSS
ASRLQLSESVAEEANPEQVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32757; Mature: 32626

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLGDLQEFSLCDLLHLMEKGKKAGQLSIWAPNGIQRIWFYQGRVVAALTPEEKHRLES
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEEEECCEEEEEECCHHHHHHHH
LLTRFGLVDEQVVSQLVARGLEEPLGRCLQRQGLISPVDLAKLFRHQLQTGLYSLFALES
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQRPEKDLPEPDSCFWRTSTELPL
CCEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCH
FKLSALEWSILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
SASRLQLSESVAEEANPEQVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMLGDLQEFSLCDLLHLMEKGKKAGQLSIWAPNGIQRIWFYQGRVVAALTPEEKHRLES
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHEEEEECCEEEEEECCHHHHHHHH
LLTRFGLVDEQVVSQLVARGLEEPLGRCLQRQGLISPVDLAKLFRHQLQTGLYSLFALES
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GQFSFLPNVPMPYREMTGLSKSATAAVLEALQQLKLEQRPEKDLPEPDSCFWRTSTELPL
CCEEECCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCH
FKLSALEWSILEQVSPSRKLTALAQALGADLLEVRYACARLAKLGLISPCEGPTVLARSS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCC
SASRLQLSESVAEEANPEQVRERLGARVPGLQDEGGPVKPSLVSRLATLLKGMREK
CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA