Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608928

Identifier: 86608928

GI number: 86608928

Start: 1535958

End: 1536587

Strand: Direct

Name: 86608928

Synonym: CYB_1460

Alternate gene names: NA

Gene position: 1535958-1536587 (Clockwise)

Preceding gene: 86608927

Following gene: 86608929

Centisome position: 50.41

GC content: 62.38

Gene sequence:

>630_bases
GTGGAAAAAGCAGTTCGCTGGGCTTGTGGGCTAGGAGTCTGCCTTTGGCTATGCAGTCTGGGATCCCTGTCGGCCCAGGC
AGATCCCAGCAGTAGCCATCTGGCAGCGCCGTTCGCGCCGGCGGGACGGAGTCCGAAGCAGTTGCACTCCTCTCCCAGTG
GACAGGAGCCTGCCCCCCAGCCCACAAACCTGCCTTCACCCGGATCCCGTCTCACCCCTGCCCCCGATCAAAACCAATGG
GCCCCTCCCAAGACGGAGCTATCGCCCTTTCCGGACTTCCCCCTTCTCAAGGAGTTGGATCCGCCCCCGCCAAGCTTGGC
CGACCTGGGCATCCATTGGGATCGCTTGGCCCTGCTGCCGGATCCCGAGCTGGCAGAGGAAATGGATGTGGAGTTCAGCC
GCCGTCTAGCCCGCCTAAACCGGCAAATTGCCAACCAACAAGAGCGCCTCTACCGCCTTTTGCAAACCTGGGACTCCGAC
GAGGCCGATATCCGCCAAATTCAGGCCCAACTGAGCCAGTTGCGGACAGAACGGGATCGCCTAGCTCTGGAACACCTGTT
GATGCTGCGGCAGCTGCAAGAGAACTTCGCCCTACCTCTACCCGACCGCTCGGCTGCCAGCTCTCCCTGA

Upstream 100 bases:

>100_bases
GCTCCGCCAACGGGACCGGAGCCGTTCGCATCAACGGGACGGAGTCCTTGGTGGGCTGGGAATGACCTGAGCAGGCTTGA
GAAAGACTGAGGAGCGCAGG

Downstream 100 bases:

>100_bases
GGAGTCCTTGGGTTCGGGTTATGATCTGAGGGAGGGGCAGACGCAACCCCCAACGGAGCTGAGGGATGGCCAAAGTGCCC
AGTAACCCAGACATTGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW
APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD
EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP

Sequences:

>Translated_209_residues
MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW
APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD
EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP
>Mature_209_residues
MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW
APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD
EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23240; Mature: 23240

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PTNLPSPGSRLTPAPDQNQWAPPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCHHHEECCC
DPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LALEHLLMLRQLQENFALPLPDRSAASSP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
PTNLPSPGSRLTPAPDQNQWAPPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCHHHEECCC
DPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LALEHLLMLRQLQENFALPLPDRSAASSP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA