| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608928
Identifier: 86608928
GI number: 86608928
Start: 1535958
End: 1536587
Strand: Direct
Name: 86608928
Synonym: CYB_1460
Alternate gene names: NA
Gene position: 1535958-1536587 (Clockwise)
Preceding gene: 86608927
Following gene: 86608929
Centisome position: 50.41
GC content: 62.38
Gene sequence:
>630_bases GTGGAAAAAGCAGTTCGCTGGGCTTGTGGGCTAGGAGTCTGCCTTTGGCTATGCAGTCTGGGATCCCTGTCGGCCCAGGC AGATCCCAGCAGTAGCCATCTGGCAGCGCCGTTCGCGCCGGCGGGACGGAGTCCGAAGCAGTTGCACTCCTCTCCCAGTG GACAGGAGCCTGCCCCCCAGCCCACAAACCTGCCTTCACCCGGATCCCGTCTCACCCCTGCCCCCGATCAAAACCAATGG GCCCCTCCCAAGACGGAGCTATCGCCCTTTCCGGACTTCCCCCTTCTCAAGGAGTTGGATCCGCCCCCGCCAAGCTTGGC CGACCTGGGCATCCATTGGGATCGCTTGGCCCTGCTGCCGGATCCCGAGCTGGCAGAGGAAATGGATGTGGAGTTCAGCC GCCGTCTAGCCCGCCTAAACCGGCAAATTGCCAACCAACAAGAGCGCCTCTACCGCCTTTTGCAAACCTGGGACTCCGAC GAGGCCGATATCCGCCAAATTCAGGCCCAACTGAGCCAGTTGCGGACAGAACGGGATCGCCTAGCTCTGGAACACCTGTT GATGCTGCGGCAGCTGCAAGAGAACTTCGCCCTACCTCTACCCGACCGCTCGGCTGCCAGCTCTCCCTGA
Upstream 100 bases:
>100_bases GCTCCGCCAACGGGACCGGAGCCGTTCGCATCAACGGGACGGAGTCCTTGGTGGGCTGGGAATGACCTGAGCAGGCTTGA GAAAGACTGAGGAGCGCAGG
Downstream 100 bases:
>100_bases GGAGTCCTTGGGTTCGGGTTATGATCTGAGGGAGGGGCAGACGCAACCCCCAACGGAGCTGAGGGATGGCCAAAGTGCCC AGTAACCCAGACATTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP
Sequences:
>Translated_209_residues MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP >Mature_209_residues MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQPTNLPSPGSRLTPAPDQNQW APPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLPDPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSD EADIRQIQAQLSQLRTERDRLALEHLLMLRQLQENFALPLPDRSAASSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23240; Mature: 23240
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC PTNLPSPGSRLTPAPDQNQWAPPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCHHHEECCC DPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LALEHLLMLRQLQENFALPLPDRSAASSP HHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEKAVRWACGLGVCLWLCSLGSLSAQADPSSSHLAAPFAPAGRSPKQLHSSPSGQEPAPQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC PTNLPSPGSRLTPAPDQNQWAPPKTELSPFPDFPLLKELDPPPPSLADLGIHWDRLALLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHCCCHHHEECCC DPELAEEMDVEFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LALEHLLMLRQLQENFALPLPDRSAASSP HHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA