Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yugF [H]

Identifier: 86608917

GI number: 86608917

Start: 1520351

End: 1521286

Strand: Reverse

Name: yugF [H]

Synonym: CYB_1449

Alternate gene names: 86608917

Gene position: 1521286-1520351 (Counterclockwise)

Preceding gene: 86608918

Following gene: 86608915

Centisome position: 49.93

GC content: 61.43

Gene sequence:

>936_bases
TTGCCATGCAGCGCCAACGCGAACACAGAGCATCGCTGGCTCTGGCGTGACCAGCCCATTCGCTACCAACAGTCGGGATC
CACAGGCCCAGCCGTGTTGCTCATCCATGGCTTTGGGGCCAGCAGCGACCATTGGCGGAAAAATTTGCCGGAGCTGGGGC
AGCACTGTCAGGTGTATGCGGTCGATTTGTTGGGGTTTGGGGGATCCGCCAAGCCCCTGCCGGGATCCCCTTTGCCCTAC
ACCTTTGAGACCTGGGGATCCCTGGTGGCAGACTTTGTCCGAGAGGTGGTGGGCCAGCCAGTCTATCTGGTGGGCAACTC
GATTGGCTGCATTGTGGCTTTGCAGGCGGCGGTTCTGGATCCGGCCCAGGTTTTAGGGGTAGCGATGTTGGATCCCTCGC
TGCGGCTGTTGCACGAGCGGAAACGGGGCCAGGTCTCCTGGCTGCGCCGCCGGTTCACCCCTTTGCTGCAATCCCTGCTG
GGGTGGCCCCCCTTTGGTCGTTTCTTCTTTGCTCAGGTGGCCCAGGCTAGGGCCATTCGCAATATCCTCCTCCAAGCCTA
CGGGCGCAAAGAAGCGGTTACCGAGGAGCTGATCCAGCTTTTGCTCAAACCCGCTTTGGAGCCGGGGGCGGCAGAGGTCT
TTTTGGCCTTTGTGCGCTATTCTCAGGGGCCTTTGGCTGAAGATCTCTTGCCTCAGCTCACCTGTCCCGTCTTGATCTTG
TGGGGGGAAGCGGATCCCTGGGAACCCATTGCTCTGGGGCGGGCCCTGGCAGAGTTTCCTTGCGTGGTGGGGTTCATCCC
ATTGCCGGGGGTCGGCCATTGCCCCCAGGATGAAGCCCCCGAGCTGGTCAACCCGCTGCTGTTGGACTGGATCCGGGATC
CCACCCGAAAACCTGAGAAAGGACTCCATTCTCTCCCCCCAGAAGAGGGGAGCTAG

Upstream 100 bases:

>100_bases
GAGCCGGGTAGTTTACTTGCCCCGATCACAAGAACTTTGTCCCGCTGTCGCGAACGGTTAGGATCGCAACGCTGACTCAA
ACCTACACTGCACCCCCATG

Downstream 100 bases:

>100_bases
GAAGCGGCGCAGCAAGAGCTTCCCTGGGCTCAAGGATGGCGCGGGCTGCCCTTGGAATTCTCATAATCTACGCCCGACCA
AGGTGCTCCAGTTGATCCAG

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPY
TFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLL
GWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL
WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS

Sequences:

>Translated_311_residues
MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPY
TFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLL
GWPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL
WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS
>Mature_310_residues
PCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYAVDLLGFGGSAKPLPGSPLPYT
FETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLDPAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLG
WPPFGRFFFAQVAQARAIRNILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLILW
GEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEKGLHSLPPEEGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34261; Mature: 34130

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYA
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHCCCEEEE
VDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLD
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCC
PAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLGWPPFGRFFFAQVAQARAIR
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE
WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK
ECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
GLHSLPPEEGS
HHHCCCCCCCC
>Mature Secondary Structure 
PCSANANTEHRWLWRDQPIRYQQSGSTGPAVLLIHGFGASSDHWRKNLPELGQHCQVYA
CCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCHHHHHCCCEEEE
VDLLGFGGSAKPLPGSPLPYTFETWGSLVADFVREVVGQPVYLVGNSIGCIVALQAAVLD
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCC
PAQVLGVAMLDPSLRLLHERKRGQVSWLRRRFTPLLQSLLGWPPFGRFFFAQVAQARAIR
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NILLQAYGRKEAVTEELIQLLLKPALEPGAAEVFLAFVRYSQGPLAEDLLPQLTCPVLIL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEE
WGEADPWEPIALGRALAEFPCVVGFIPLPGVGHCPQDEAPELVNPLLLDWIRDPTRKPEK
ECCCCCCCHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
GLHSLPPEEGS
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]