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The map label for this gene is yebC [C]

Identifier: 86608824

GI number: 86608824

Start: 1419905

End: 1420654

Strand: Direct

Name: yebC [C]

Synonym: CYB_1350

Alternate gene names: 86608824

Gene position: 1419905-1420654 (Clockwise)

Preceding gene: 86608823

Following gene: 86608827

Centisome position: 46.6

GC content: 59.6

Gene sequence:

>750_bases
ATGGCAGGACACAGCAAGTGGGCCAACATTAAACGGCAAAAGGCCCGTGTAGATGCCAAAAAGGGCAGCCTCTTTACCAA
ACTCTCGCGGGCCATCATCGTGGCAGCTCGCAACGGCTTGCCAGATCCGGATGGGAATTTTCAGTTGCGGGCGGCAGTGG
AGAAAGCCAAAGCAGCGGGGATGCCCAGCGAAAACATTGAACGAGCCATTGCCAAGGGAGCCGGCAACTGGAGCGACGAC
AGCCCCCTGGAAGAAGTTCGCTACGAGGGCTACGGCCCCGGTGGGGTGGCTGTGTTGATCGAGGCCATGACCGACAACCG
CAACCGCACGGCTGCCGAGGTGCGAGAAGCCTTCAGCAAAACCGGCGGCAGCTTGGGAGAAGCCGGCTGCGTGAGCTGGC
TGTTCCGGCAAAAAGGGGTGATCAGCCTGGAGGAGGTGTTGGATCCCGAAGCCCTGTTGCTGGCGGTGGCGGAAGCGGGA
GGAGACGACTTCAAGGTGGAAGGCACAGGAGCAGAGGTGTACTGCGACTACTCTTTGCTGGAGCAGGTGGCCACCTACCT
GAAAAAAGAGGGCTACCCAGTGCAAGATGCGGCCATCCGCTGGATCCCATCCACTGAGGTGCATGTGGAGGATCCCGATA
CGGCCAAGTCAGTGCTTGCCCTGATGGAGCGTCTCGACAACCTAGACGATGTGCAGAATGTCTACGCCAATTTCGAGATC
GACGAGGCGGTGATGGAAAGCCTGGCCTGA

Upstream 100 bases:

>100_bases
CCCTCCCAGTTGCCGTGGGGTTGAGTCCTGAGCCGAGGTGATCTAGGCTTCAAAAGTGGAGGGATCCCTCCAATTCATTG
CTTGACTGGTGTGTGGCGGC

Downstream 100 bases:

>100_bases
GAACAGGCTGCCATCATCTTCCGAGAAAGGGAAACCTTCAACAGAAGCATCCGTCAGCGGAGCTTAACGGCGGTGCCGGC
GGCGGTAACGAGGATCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDGNFQLRAAVEKAKAAGMPSENIERAIAKGAGNWSDD
SPLEEVRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSKTGGSLGEAGCVSWLFRQKGVISLEEVLDPEALLLAVAEAG
GDDFKVEGTGAEVYCDYSLLEQVATYLKKEGYPVQDAAIRWIPSTEVHVEDPDTAKSVLALMERLDNLDDVQNVYANFEI
DEAVMESLA

Sequences:

>Translated_249_residues
MAGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDGNFQLRAAVEKAKAAGMPSENIERAIAKGAGNWSDD
SPLEEVRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSKTGGSLGEAGCVSWLFRQKGVISLEEVLDPEALLLAVAEAG
GDDFKVEGTGAEVYCDYSLLEQVATYLKKEGYPVQDAAIRWIPSTEVHVEDPDTAKSVLALMERLDNLDDVQNVYANFEI
DEAVMESLA
>Mature_248_residues
AGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDGNFQLRAAVEKAKAAGMPSENIERAIAKGAGNWSDDS
PLEEVRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSKTGGSLGEAGCVSWLFRQKGVISLEEVLDPEALLLAVAEAGG
DDFKVEGTGAEVYCDYSLLEQVATYLKKEGYPVQDAAIRWIPSTEVHVEDPDTAKSVLALMERLDNLDDVQNVYANFEID
EAVMESLA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=32.1285140562249, Blast_Score=116, Evalue=2e-26,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=46.5863453815261, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=35.4430379746835, Blast_Score=126, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17556100, Length=251, Percent_Identity=25.8964143426295, Blast_Score=74, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=31.9391634980989, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24583305, Length=253, Percent_Identity=29.6442687747036, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1350_SYNJB (Q2JLT1)

Other databases:

- EMBL:   CP000240
- RefSeq:   YP_477586.1
- ProteinModelPortal:   Q2JLT1
- SMR:   Q2JLT1
- STRING:   Q2JLT1
- GeneID:   3901180
- GenomeReviews:   CP000240_GR
- KEGG:   cyb:CYB_1350
- TIGR:   CYB_1350
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   GCVAYLF
- PhylomeDB:   Q2JLT1
- ProtClustDB:   PRK00110
- BioCyc:   SSP321332:CYB_1350-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26950; Mature: 26818

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDGNFQLRAAVEKAKAAG
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCCEEHHHHHHHHHHCC
MPSENIERAIAKGAGNWSDDSPLEEVRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSK
CCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHEEEEHHHCCCCCHHHHHHHHHHH
TGGSLGEAGCVSWLFRQKGVISLEEVLDPEALLLAVAEAGGDDFKVEGTGAEVYCDYSLL
CCCCCCHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHCCCCCEEEECCCCEEEECHHHH
EQVATYLKKEGYPVQDAAIRWIPSTEVHVEDPDTAKSVLALMERLDNLDDVQNVYANFEI
HHHHHHHHHCCCCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCH
DEAVMESLA
HHHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDGNFQLRAAVEKAKAAG
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCCCCCEEHHHHHHHHHHCC
MPSENIERAIAKGAGNWSDDSPLEEVRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSK
CCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHEEEEHHHCCCCCHHHHHHHHHHH
TGGSLGEAGCVSWLFRQKGVISLEEVLDPEALLLAVAEAGGDDFKVEGTGAEVYCDYSLL
CCCCCCHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHCCCCCEEEECCCCEEEECHHHH
EQVATYLKKEGYPVQDAAIRWIPSTEVHVEDPDTAKSVLALMERLDNLDDVQNVYANFEI
HHHHHHHHHCCCCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHCCCH
DEAVMESLA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA