Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608823

Identifier: 86608823

GI number: 86608823

Start: 1419042

End: 1419602

Strand: Direct

Name: 86608823

Synonym: CYB_1349

Alternate gene names: NA

Gene position: 1419042-1419602 (Clockwise)

Preceding gene: 86608816

Following gene: 86608824

Centisome position: 46.58

GC content: 60.25

Gene sequence:

>561_bases
GTGCCGGGGCGCAATCTCGATCCTGGGGCGCAAATCCGGGTGCGTAACGAGCTGGTCAAGACCTGTGGGGACTATCGTTG
CGAAGGCTATCGCTTTTCGGTACGGGTACCGATCAGCCCTGAAGACACCCTGGAAACTCTGCTGGGGCGGCTGGATACGG
AGATGCTGCGGGAGGTGGATCGGGTGTTTCAAACTCGGCCCGATCTGAATCGGGTCATTGTCGATGGCTACGTCTTCTCG
GGTACTCCCGCTTTTGTCAGCCGGGAAGTGCTGCTGCAAACAATGTTTGTGCCCCGTCACCGTTGGGAAGTGGGGCGCTT
TGGGCCAGAGCAAGATGCGATTTTCTATGCCGAGCTGTTGGGACAGGTGACGCCCTTTCTAACTCCATCCCCAACCCCCA
CGCCTACACCTGGGCCTGTGCCTGGAGAAGGTGTGCCCCCTCTGCCCCCGCCTCCTGGGGAAACTCCTCCCATAGAGGCA
ACGCCTACCCCTCAAGAAACCCCAGCCGCTCCACCTCCACCTCAAGGGGATGTAATTCAGCGGCAGCCGATTCAGCCCTG
A

Upstream 100 bases:

>100_bases
ATTTGGCTTGTTTTTCGGATCCCTAGTTTGGGCAGGATGGGCAAGTCAACTCCAGCTATGGGCCCAGCCGGTCGAACAGC
AACCCCAGGAGGAAGTCCTT

Downstream 100 bases:

>100_bases
TGGGTTTGTTGGGTAGCTGAGTCTGGGTTGTGAAGGATCCCTCGTTATAGTCATTTCAAACCAGATTGAGATACTCCCCA
AGCGCTCCGCGCCGCTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPGRNLDPGAQIRVRNELVKTCGDYRCEGYRFSVRVPISPEDTLETLLGRLDTEMLREVDRVFQTRPDLNRVIVDGYVFS
GTPAFVSREVLLQTMFVPRHRWEVGRFGPEQDAIFYAELLGQVTPFLTPSPTPTPTPGPVPGEGVPPLPPPPGETPPIEA
TPTPQETPAAPPPPQGDVIQRQPIQP

Sequences:

>Translated_186_residues
MPGRNLDPGAQIRVRNELVKTCGDYRCEGYRFSVRVPISPEDTLETLLGRLDTEMLREVDRVFQTRPDLNRVIVDGYVFS
GTPAFVSREVLLQTMFVPRHRWEVGRFGPEQDAIFYAELLGQVTPFLTPSPTPTPTPGPVPGEGVPPLPPPPGETPPIEA
TPTPQETPAAPPPPQGDVIQRQPIQP
>Mature_185_residues
PGRNLDPGAQIRVRNELVKTCGDYRCEGYRFSVRVPISPEDTLETLLGRLDTEMLREVDRVFQTRPDLNRVIVDGYVFSG
TPAFVSREVLLQTMFVPRHRWEVGRFGPEQDAIFYAELLGQVTPFLTPSPTPTPTPGPVPGEGVPPLPPPPGETPPIEAT
PTPQETPAAPPPPQGDVIQRQPIQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20539; Mature: 20407

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGRNLDPGAQIRVRNELVKTCGDYRCEGYRFSVRVPISPEDTLETLLGRLDTEMLREVD
CCCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH
RVFQTRPDLNRVIVDGYVFSGTPAFVSREVLLQTMFVPRHRWEVGRFGPEQDAIFYAELL
HHHHCCCCCCEEEECCEEECCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH
GQVTPFLTPSPTPTPTPGPVPGEGVPPLPPPPGETPPIEATPTPQETPAAPPPPQGDVIQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQPIQP
CCCCCC
>Mature Secondary Structure 
PGRNLDPGAQIRVRNELVKTCGDYRCEGYRFSVRVPISPEDTLETLLGRLDTEMLREVD
CCCCCCCCCEEEHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHH
RVFQTRPDLNRVIVDGYVFSGTPAFVSREVLLQTMFVPRHRWEVGRFGPEQDAIFYAELL
HHHHCCCCCCEEEECCEEECCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH
GQVTPFLTPSPTPTPTPGPVPGEGVPPLPPPPGETPPIEATPTPQETPAAPPPPQGDVIQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQPIQP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA