Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608789

Identifier: 86608789

GI number: 86608789

Start: 1377268

End: 1377837

Strand: Reverse

Name: 86608789

Synonym: CYB_1314

Alternate gene names: NA

Gene position: 1377837-1377268 (Counterclockwise)

Preceding gene: 86608790

Following gene: 86608788

Centisome position: 45.22

GC content: 57.19

Gene sequence:

>570_bases
ATGATTTTGAATAAATCAGAGCCCATGATGAACACCGCCGAAGCCCTTGAGATTCTCAACCTTCCGCCGGACGCAACCGA
GCGGCAGATCCGGGGGCGACTGTTTCAGGAATACCAAACCCTCAGTACTGCCCTCGCAGAACTGGAGGACGAGCGACAAA
GACCCTTGCTAGAGGCGCAACTGGCGCGGCTGAATGAGGCGCGGGATGTATTGCTTAGCGGGGGATCCCAGGCTGAGAAG
GGTTTGTCTTGGGTCAGCCCAGAGGACTTGCCCCCCCAGGTGATTGTGCTGCTTTACCAAGCCAATGGGCAGGAGGGGAT
CTGTACGCGCCAGGTTGGGGGTCAAGATATCGTCATTGCTTTCGAGAGCTCGTTTGCGGCAAGAAAATATGCGCAGCGGT
TGGCTCAACAGGGACTGCCCAAGCCCTTGGCAGAACGCTTTGACACGCAGGAGATCGTCGATTTTTGCCGCAGCGGAGGG
TATGGGTTGATGGTGGTTCCGGCCAGCGAAACGCTGGAGCCTCTACAAGAAAGTACGGAAGCTGCCCGTGATTGGCAGGG
CAGGTCTTGA

Upstream 100 bases:

>100_bases
GCGAACGGTGAGTCCACCCTCTCTTCTGGCCGAGAAAGCGGGCAGCCACGATCATAGGAGAATTTCTCTCCAGAGACTCT
CAAAGCAGCTAGTCTAGGCA

Downstream 100 bases:

>100_bases
TGTCGTTTGGCCTCGATCCACTTGCGTTAAGGGTGCCCTCGATGATTAGTGTGGAACCGATCTCTGTGGACGAGTTTCGC
CAGCTCATGGCCGCCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK
GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG
YGLMVVPASETLEPLQESTEAARDWQGRS

Sequences:

>Translated_189_residues
MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK
GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG
YGLMVVPASETLEPLQESTEAARDWQGRS
>Mature_189_residues
MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQLARLNEARDVLLSGGSQAEK
GLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIAFESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGG
YGLMVVPASETLEPLQESTEAARDWQGRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20989; Mature: 20989

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQ
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LARLNEARDVLLSGGSQAEKGLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIA
HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCEECCCCCCEEEEE
FESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGGYGLMVVPASETLEPLQESTE
ECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
AARDWQGRS
HHHCCCCCC
>Mature Secondary Structure
MILNKSEPMMNTAEALEILNLPPDATERQIRGRLFQEYQTLSTALAELEDERQRPLLEAQ
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LARLNEARDVLLSGGSQAEKGLSWVSPEDLPPQVIVLLYQANGQEGICTRQVGGQDIVIA
HHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCEECCCCCCEEEEE
FESSFAARKYAQRLAQQGLPKPLAERFDTQEIVDFCRSGGYGLMVVPASETLEPLQESTE
ECCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
AARDWQGRS
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA