| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is coaE
Identifier: 86608781
GI number: 86608781
Start: 1369405
End: 1370121
Strand: Reverse
Name: coaE
Synonym: CYB_1306
Alternate gene names: 86608781
Gene position: 1370121-1369405 (Counterclockwise)
Preceding gene: 86608782
Following gene: 86608780
Centisome position: 44.97
GC content: 61.51
Gene sequence:
>717_bases ATGAGGATCATCGGCCTGACGGGCGGAGTGGGCACGGGCAAATCCACGGTGGCCCGCATCCTGGAGCAGCACGGGATCCC AGTAGCCGATGCAGATCAAATGGCCCGCCAGGCCTTGGCGGTGGGATCCCCCATTCGCGAGCGGGTACTGGAACGCTATG GGAAGGTCATCCAAACACCCTCCGGGGATCTGGATCGCCGGCGGTTGGGCCAGATCGTGTTTGCAGATGCCGCTGAGCGG GCTTGGCTAGAGGCCCAAATCCACCCTTTCGTTAGAGCTCAACTGCAAGATTTTCTGTCCGCGTTGGCGGAGCAGAGCTC TAAAGTCCATGGGGTGCCGCTTGAGGAAGAGCCTGCCTCCCAAAAGCGTAGCGGGGTAGGATTTTCTTCTGGGCAGGGAT CCCAAACCGTTTGTCTGATGATCCCGTTGCTGTTTGAAGCCCACATGGAAAATTGGGCCAGCGAGATTTGGGTGGTGACT TGCACCCCAGAGCAGCAGCGGCAACGCCTTGCCCGCCGGGATCCCCTGACGCCGGAAGAAATCGAAGCTCGCATTGCCAG CCAGTGGCCTTTGGCGGAAAAAGTGCGCCGTGCAGACGTGGTGCTGGACAACTCCGGATCCCTGGCCGAGCTGGAAGCCC AGGTGAAGCAAGCTTTGGCGTCGGCGGGCCAGAGGCCATTTGCCTCACCCCCGCGGGCCGGATACAGTGACGGGTAG
Upstream 100 bases:
>100_bases TGCCCGCTTCTGCAGAGCACCGTTCTAACGACTCCGTCCGAGTAGCGCAAACGGCAATGGCCGCACCAGCGGCCTCTTCT TGACTATGGCCTACAGCTCG
Downstream 100 bases:
>100_bases GGTCTGGTGGGACGGATCCCTTGGTATCCATGTACGGATGGGTTGAGGGAGAAACGATGCAGGAAGCAGGTTGCATCGGC AAGACGGAGTTTGCCCAAGC
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRIIGLTGGVGTGKSTVARILEQHGIPVADADQMARQALAVGSPIRERVLERYGKVIQTPSGDLDRRRLGQIVFADAAER AWLEAQIHPFVRAQLQDFLSALAEQSSKVHGVPLEEEPASQKRSGVGFSSGQGSQTVCLMIPLLFEAHMENWASEIWVVT CTPEQQRQRLARRDPLTPEEIEARIASQWPLAEKVRRADVVLDNSGSLAELEAQVKQALASAGQRPFASPPRAGYSDG
Sequences:
>Translated_238_residues MRIIGLTGGVGTGKSTVARILEQHGIPVADADQMARQALAVGSPIRERVLERYGKVIQTPSGDLDRRRLGQIVFADAAER AWLEAQIHPFVRAQLQDFLSALAEQSSKVHGVPLEEEPASQKRSGVGFSSGQGSQTVCLMIPLLFEAHMENWASEIWVVT CTPEQQRQRLARRDPLTPEEIEARIASQWPLAEKVRRADVVLDNSGSLAELEAQVKQALASAGQRPFASPPRAGYSDG >Mature_238_residues MRIIGLTGGVGTGKSTVARILEQHGIPVADADQMARQALAVGSPIRERVLERYGKVIQTPSGDLDRRRLGQIVFADAAER AWLEAQIHPFVRAQLQDFLSALAEQSSKVHGVPLEEEPASQKRSGVGFSSGQGSQTVCLMIPLLFEAHMENWASEIWVVT CTPEQQRQRLARRDPLTPEEIEARIASQWPLAEKVRRADVVLDNSGSLAELEAQVKQALASAGQRPFASPPRAGYSDG
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain
Homologues:
Organism=Homo sapiens, GI191252797, Length=216, Percent_Identity=33.7962962962963, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI191252795, Length=216, Percent_Identity=33.7962962962963, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI110227607, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI110227605, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI110227603, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI110227601, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI205277394, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786292, Length=205, Percent_Identity=30.7317073170732, Blast_Score=100, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17554944, Length=223, Percent_Identity=31.8385650224215, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI24644728, Length=214, Percent_Identity=31.3084112149533, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24658602, Length=200, Percent_Identity=29, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAE_SYNJB (Q2JLX1)
Other databases:
- EMBL: CP000240 - RefSeq: YP_477543.1 - ProteinModelPortal: Q2JLX1 - SMR: Q2JLX1 - STRING: Q2JLX1 - GeneID: 3901040 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_1306 - TIGR: CYB_1306 - eggNOG: COG0237 - HOGENOM: HBG650290 - OMA: ARPGMTE - PhylomeDB: Q2JLX1 - ProtClustDB: PRK14730 - BioCyc: SSP321332:CYB_1306-MONOMER - GO: GO:0005737 - HAMAP: MF_00376 - InterPro: IPR001977 - TIGRFAMs: TIGR00152
Pfam domain/function: PF01121 CoaE
EC number: =2.7.1.24
Molecular weight: Translated: 25968; Mature: 25968
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS51219 DPCK; PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIGLTGGVGTGKSTVARILEQHGIPVADADQMARQALAVGSPIRERVLERYGKVIQTP CEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SGDLDRRRLGQIVFADAAERAWLEAQIHPFVRAQLQDFLSALAEQSSKVHGVPLEEEPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QKRSGVGFSSGQGSQTVCLMIPLLFEAHMENWASEIWVVTCTPEQQRQRLARRDPLTPEE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCCCHHH IEARIASQWPLAEKVRRADVVLDNSGSLAELEAQVKQALASAGQRPFASPPRAGYSDG HHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRIIGLTGGVGTGKSTVARILEQHGIPVADADQMARQALAVGSPIRERVLERYGKVIQTP CEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC SGDLDRRRLGQIVFADAAERAWLEAQIHPFVRAQLQDFLSALAEQSSKVHGVPLEEEPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH QKRSGVGFSSGQGSQTVCLMIPLLFEAHMENWASEIWVVTCTPEQQRQRLARRDPLTPEE HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHCCCCCHHH IEARIASQWPLAEKVRRADVVLDNSGSLAELEAQVKQALASAGQRPFASPPRAGYSDG HHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA