| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608780
Identifier: 86608780
GI number: 86608780
Start: 1368869
End: 1369348
Strand: Reverse
Name: 86608780
Synonym: CYB_1305
Alternate gene names: NA
Gene position: 1369348-1368869 (Counterclockwise)
Preceding gene: 86608781
Following gene: 86608779
Centisome position: 44.95
GC content: 60.0
Gene sequence:
>480_bases ATGCAGGAAGCAGGTTGCATCGGCAAGACGGAGTTTGCCCAAGCTCTGGCTGCGCGGGAGCAGGAAATCCAGCTTTTGCG AGAGCGCAATCGCATCTTGCAGGGCCAGGTAGACCTTCTGGAGCTGCGCCAAGAAAAGCAACACCGACAAATTCGCAGCT ATGAGGCGGAGATTGAGCAGCTTTACCAAGAGAAGCAGTTGCTGGAGCAGATGATTCAAGAGTTGCCAGAGCTCTACCGG CGCAAGCTGCAAGCCCGCCTGCAGCCCATCCGCCAGCGCATCGCCGCCATCCAGGCAGAGAATCGCCAGCTCAGGAAGGA GGTGTATCAGCTCAGCTACCGCGTGCAGCACATAGATCAGCTCGACTCGCCCGGCTGGATCCAGCTTCCCTCTCTGCGTC GCCGGGATCCCAAGTCCTCAGCGGAGCGGAGCACAAAAGCTCTGCCGGTCTCCCCCCCTGGTGTCCAGCCCTGCTCTTGA
Upstream 100 bases:
>100_bases GGCCATTTGCCTCACCCCCGCGGGCCGGATACAGTGACGGGTAGGGTCTGGTGGGACGGATCCCTTGGTATCCATGTACG GATGGGTTGAGGGAGAAACG
Downstream 100 bases:
>100_bases TGGGCAGGGAGGGATCCCGCCATCGAGAAGCCAGAATAGGGGAGCCCCGGTGGGATCGCGTCAGCAGAGCAGAGCTCTTG CGCGGTTCCGGTTGGGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQEAGCIGKTEFAQALAAREQEIQLLRERNRILQGQVDLLELRQEKQHRQIRSYEAEIEQLYQEKQLLEQMIQELPELYR RKLQARLQPIRQRIAAIQAENRQLRKEVYQLSYRVQHIDQLDSPGWIQLPSLRRRDPKSSAERSTKALPVSPPGVQPCS
Sequences:
>Translated_159_residues MQEAGCIGKTEFAQALAAREQEIQLLRERNRILQGQVDLLELRQEKQHRQIRSYEAEIEQLYQEKQLLEQMIQELPELYR RKLQARLQPIRQRIAAIQAENRQLRKEVYQLSYRVQHIDQLDSPGWIQLPSLRRRDPKSSAERSTKALPVSPPGVQPCS >Mature_159_residues MQEAGCIGKTEFAQALAAREQEIQLLRERNRILQGQVDLLELRQEKQHRQIRSYEAEIEQLYQEKQLLEQMIQELPELYR RKLQARLQPIRQRIAAIQAENRQLRKEVYQLSYRVQHIDQLDSPGWIQLPSLRRRDPKSSAERSTKALPVSPPGVQPCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18736; Mature: 18736
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEAGCIGKTEFAQALAAREQEIQLLRERNRILQGQVDLLELRQEKQHRQIRSYEAEIEQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LYQEKQLLEQMIQELPELYRRKLQARLQPIRQRIAAIQAENRQLRKEVYQLSYRVQHIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSPGWIQLPSLRRRDPKSSAERSTKALPVSPPGVQPCS CCCCCCEECCHHHCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQEAGCIGKTEFAQALAAREQEIQLLRERNRILQGQVDLLELRQEKQHRQIRSYEAEIEQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LYQEKQLLEQMIQELPELYRRKLQARLQPIRQRIAAIQAENRQLRKEVYQLSYRVQHIDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDSPGWIQLPSLRRRDPKSSAERSTKALPVSPPGVQPCS CCCCCCEECCHHHCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA