| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608778
Identifier: 86608778
GI number: 86608778
Start: 1365814
End: 1366362
Strand: Reverse
Name: 86608778
Synonym: CYB_1303
Alternate gene names: NA
Gene position: 1366362-1365814 (Counterclockwise)
Preceding gene: 86608779
Following gene: 86608777
Centisome position: 44.85
GC content: 60.11
Gene sequence:
>549_bases TTGCCGACGATGACCTTCCCCATCTCTCCCTTAATTCGCTGCGCTGTGCAGGCTCTGTACTGGGGACTGGTTCTGCCCCT ACCCATCCTGCTGGCTCGGCAACAGGCAACACCTCTTGAGCTGGGATCCCTTTGGATTGCTCTGCTGCTGGGATGGGGGG TAGTCCTGGGATCCCTGAGCCAGCAGATTCAGTTGGACGAAGAGGGCATGCAGGCCACCTACCCCAGTTGGGTGCCGCCT TTTGTGCGGCAGGAGTGGCAGATCCGGTGGGCCGATATCGAGCGCATTGAGCCCCGCTCCACCAGCCAGGGTGGTATGGT GTATTACTTGGTCAGCCGAGGGGGGGATCGCGTACTTTTGCCGATGCGGGTAGCTGGGTTCAAGCGCCTGTTGGCTGAGA TTCGACGGCACGCTCAACTGGAGATTGGCGGGCTGCGCCCCTACGTTCAGCCTTGGATGTACGGCCTTCTTGGATGTTTT GCTCTGCTTCTGTTGCTCTGGGATGGGATGGTCGCCATCTGGGTCTGGGCAAGTTCGGTGGGAACCTAG
Upstream 100 bases:
>100_bases AGCTTGCCGTTCGCCTCAGCGGGACGGAGTCCTTGGAGGAGGAGGTGCCTTTTTAAGCGCTATCTAGCGCTATCTTAAGT TTGATAAAGCCAGCCTCATC
Downstream 100 bases:
>100_bases CGCAACCACAGACGGTTCCGGGTCTAGCCATCCCGACAGGGATCCCAGCTCCAGCGGGCGGTTGCAGTCCAGATCCCGCC CACGCCCTTCTGCGCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPP FVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCF ALLLLLWDGMVAIWVWASSVGT
Sequences:
>Translated_182_residues MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPP FVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCF ALLLLLWDGMVAIWVWASSVGT >Mature_181_residues PTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPPF VRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFA LLLLLWDGMVAIWVWASSVGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20561; Mature: 20429
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QQIQLDEEGMQATYPSWVPPFVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLL HHHHCCCCCCCCCCCCCCCHHHHHHHEEEECHHHHCCCCCCCCCCEEEEEEECCCCEEEE PMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFALLLLLWDGMVAIWVWASSV HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GT CC >Mature Secondary Structure PTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH QQIQLDEEGMQATYPSWVPPFVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLL HHHHCCCCCCCCCCCCCCCHHHHHHHEEEECHHHHCCCCCCCCCCEEEEEEECCCCEEEE PMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFALLLLLWDGMVAIWVWASSV HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC GT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]