Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608778

Identifier: 86608778

GI number: 86608778

Start: 1365814

End: 1366362

Strand: Reverse

Name: 86608778

Synonym: CYB_1303

Alternate gene names: NA

Gene position: 1366362-1365814 (Counterclockwise)

Preceding gene: 86608779

Following gene: 86608777

Centisome position: 44.85

GC content: 60.11

Gene sequence:

>549_bases
TTGCCGACGATGACCTTCCCCATCTCTCCCTTAATTCGCTGCGCTGTGCAGGCTCTGTACTGGGGACTGGTTCTGCCCCT
ACCCATCCTGCTGGCTCGGCAACAGGCAACACCTCTTGAGCTGGGATCCCTTTGGATTGCTCTGCTGCTGGGATGGGGGG
TAGTCCTGGGATCCCTGAGCCAGCAGATTCAGTTGGACGAAGAGGGCATGCAGGCCACCTACCCCAGTTGGGTGCCGCCT
TTTGTGCGGCAGGAGTGGCAGATCCGGTGGGCCGATATCGAGCGCATTGAGCCCCGCTCCACCAGCCAGGGTGGTATGGT
GTATTACTTGGTCAGCCGAGGGGGGGATCGCGTACTTTTGCCGATGCGGGTAGCTGGGTTCAAGCGCCTGTTGGCTGAGA
TTCGACGGCACGCTCAACTGGAGATTGGCGGGCTGCGCCCCTACGTTCAGCCTTGGATGTACGGCCTTCTTGGATGTTTT
GCTCTGCTTCTGTTGCTCTGGGATGGGATGGTCGCCATCTGGGTCTGGGCAAGTTCGGTGGGAACCTAG

Upstream 100 bases:

>100_bases
AGCTTGCCGTTCGCCTCAGCGGGACGGAGTCCTTGGAGGAGGAGGTGCCTTTTTAAGCGCTATCTAGCGCTATCTTAAGT
TTGATAAAGCCAGCCTCATC

Downstream 100 bases:

>100_bases
CGCAACCACAGACGGTTCCGGGTCTAGCCATCCCGACAGGGATCCCAGCTCCAGCGGGCGGTTGCAGTCCAGATCCCGCC
CACGCCCTTCTGCGCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPP
FVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCF
ALLLLLWDGMVAIWVWASSVGT

Sequences:

>Translated_182_residues
MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPP
FVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCF
ALLLLLWDGMVAIWVWASSVGT
>Mature_181_residues
PTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLSQQIQLDEEGMQATYPSWVPPF
VRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLLPMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFA
LLLLLWDGMVAIWVWASSVGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20561; Mature: 20429

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQIQLDEEGMQATYPSWVPPFVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLL
HHHHCCCCCCCCCCCCCCCHHHHHHHEEEECHHHHCCCCCCCCCCEEEEEEECCCCEEEE
PMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFALLLLLWDGMVAIWVWASSV
HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GT
CC
>Mature Secondary Structure 
PTMTFPISPLIRCAVQALYWGLVLPLPILLARQQATPLELGSLWIALLLGWGVVLGSLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QQIQLDEEGMQATYPSWVPPFVRQEWQIRWADIERIEPRSTSQGGMVYYLVSRGGDRVLL
HHHHCCCCCCCCCCCCCCCHHHHHHHEEEECHHHHCCCCCCCCCCEEEEEEECCCCEEEE
PMRVAGFKRLLAEIRRHAQLEIGGLRPYVQPWMYGLLGCFALLLLLWDGMVAIWVWASSV
HHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]