| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608777
Identifier: 86608777
GI number: 86608777
Start: 1364733
End: 1365587
Strand: Reverse
Name: 86608777
Synonym: CYB_1302
Alternate gene names: NA
Gene position: 1365587-1364733 (Counterclockwise)
Preceding gene: 86608778
Following gene: 86608776
Centisome position: 44.82
GC content: 61.05
Gene sequence:
>855_bases GTGCGGAGCACTTTGTCTGGGATCCCTGCTGCCCCTTCTCTGGAGAGGTTGAGTCTTGAGCAGGTCAACCTCTCCGCCTC TTCGCTGGCCCTGCTGGACCATTGCCCCCGCCTGTTTCGCTATGTATACCTGGAGCGGTTGATCTGGCCCGCTGCCAGTG TTTTTGAGCACGAGCTGGAGCAGAGGCGCGGACGGCAGTTTCACCGTTTGGTGGAGTGGCACAGCCGCGGGCGGCAGGTG GAGCCGCGTTTGTCTGCCCTGGATGAAGTGGTGCAGCAGTGGTGGCAGGTGTTCTTGGCCAGCTCCCATGCCCATCCCCA GGGACGGGTGTTGGCGGAGTTGCCCCTGTGGCAACGGATTGAGGGCTTTAAGTTGATAGCCCGTTTGGATCGGCTGGTGA TTATCCCCGGATCCCTGCACATCCTGGACTGGAAAACTGAGCGTCAACGTCCTCGCGATGCACAGTTGGCCCAAGACTGG CAGGTGCGCCTTTACCCTCTGCTGCTCTGCGAGGTGGCCCAGCAGCTGCCCCTGGAAGGCCCTTTTGAGCCGGAGCAGGT GCAACTGACCTTTTGGTATGTGCAACATCCGCAGCAGCCCTTCCACCGGTATTACAGCGCCGCCGCCTATGAGCAAGACC TGGCCCACCTAAGAGCCACTCTGAACCACCTGCGGCAACTGGAGGCGCAAGACTTTCCCATGACCCCCCACACTGAGCGC TGCAACAGTTGTCTGTTTCGCTCCCGCTGCCATGGGCTGCTACCGGAAGGGATCCCCTCTCAAGACCTCACGGATTGGGT CTGGCCAATGCAGGAGCCCGCGACACCTGCGGATCCCATCGCCGATACTTATTGA
Upstream 100 bases:
>100_bases GAGCAGGTTGGAAATGAGCTCCTCCGCTGGGGCGGTGGGGGTATCCTGAGAGCAGTGGAACTTAGCCCCCTCTTGCCAGC TCTTCCCCTTCGCGACAGCG
Downstream 100 bases:
>100_bases GGGCCGGGGCAGGAGCTGTTTTGGCAGGAGCTGTTTTGGCAGCAACCCATGCATACCCTATTATGGGGCCATTCGCGATA GCGAGACGGAGTCCTTTGTT
Product: leucine-rich repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRSTLSGIPAAPSLERLSLEQVNLSASSLALLDHCPRLFRYVYLERLIWPAASVFEHELEQRRGRQFHRLVEWHSRGRQV EPRLSALDEVVQQWWQVFLASSHAHPQGRVLAELPLWQRIEGFKLIARLDRLVIIPGSLHILDWKTERQRPRDAQLAQDW QVRLYPLLLCEVAQQLPLEGPFEPEQVQLTFWYVQHPQQPFHRYYSAAAYEQDLAHLRATLNHLRQLEAQDFPMTPHTER CNSCLFRSRCHGLLPEGIPSQDLTDWVWPMQEPATPADPIADTY
Sequences:
>Translated_284_residues MRSTLSGIPAAPSLERLSLEQVNLSASSLALLDHCPRLFRYVYLERLIWPAASVFEHELEQRRGRQFHRLVEWHSRGRQV EPRLSALDEVVQQWWQVFLASSHAHPQGRVLAELPLWQRIEGFKLIARLDRLVIIPGSLHILDWKTERQRPRDAQLAQDW QVRLYPLLLCEVAQQLPLEGPFEPEQVQLTFWYVQHPQQPFHRYYSAAAYEQDLAHLRATLNHLRQLEAQDFPMTPHTER CNSCLFRSRCHGLLPEGIPSQDLTDWVWPMQEPATPADPIADTY >Mature_284_residues MRSTLSGIPAAPSLERLSLEQVNLSASSLALLDHCPRLFRYVYLERLIWPAASVFEHELEQRRGRQFHRLVEWHSRGRQV EPRLSALDEVVQQWWQVFLASSHAHPQGRVLAELPLWQRIEGFKLIARLDRLVIIPGSLHILDWKTERQRPRDAQLAQDW QVRLYPLLLCEVAQQLPLEGPFEPEQVQLTFWYVQHPQQPFHRYYSAAAYEQDLAHLRATLNHLRQLEAQDFPMTPHTER CNSCLFRSRCHGLLPEGIPSQDLTDWVWPMQEPATPADPIADTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33222; Mature: 33222
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTLSGIPAAPSLERLSLEQVNLSASSLALLDHCPRLFRYVYLERLIWPAASVFEHELE CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRGRQFHRLVEWHSRGRQVEPRLSALDEVVQQWWQVFLASSHAHPQGRVLAELPLWQRI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH EGFKLIARLDRLVIIPGSLHILDWKTERQRPRDAQLAQDWQVRLYPLLLCEVAQQLPLEG HHHHHHHHHCCEEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFEPEQVQLTFWYVQHPQQPFHRYYSAAAYEQDLAHLRATLNHLRQLEAQDFPMTPHTER CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CNSCLFRSRCHGLLPEGIPSQDLTDWVWPMQEPATPADPIADTY HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRSTLSGIPAAPSLERLSLEQVNLSASSLALLDHCPRLFRYVYLERLIWPAASVFEHELE CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRRGRQFHRLVEWHSRGRQVEPRLSALDEVVQQWWQVFLASSHAHPQGRVLAELPLWQRI HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH EGFKLIARLDRLVIIPGSLHILDWKTERQRPRDAQLAQDWQVRLYPLLLCEVAQQLPLEG HHHHHHHHHCCEEECCCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFEPEQVQLTFWYVQHPQQPFHRYYSAAAYEQDLAHLRATLNHLRQLEAQDFPMTPHTER CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CNSCLFRSRCHGLLPEGIPSQDLTDWVWPMQEPATPADPIADTY HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA