| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608756
Identifier: 86608756
GI number: 86608756
Start: 1336294
End: 1337025
Strand: Reverse
Name: 86608756
Synonym: CYB_1281
Alternate gene names: NA
Gene position: 1337025-1336294 (Counterclockwise)
Preceding gene: 86608757
Following gene: 86608755
Centisome position: 43.88
GC content: 61.34
Gene sequence:
>732_bases ATGGGATCCCAGGGATACTGGCTCCCCTACCGCGTGGCCTCTGGGGCCCGGCAAATGGAGCAGGATGCCTGGCTTCTGCA GCGGCTGCGCCATGACCCTCACCCCTGCCTGCGCTTTTATGGCTGGGATCAGCTTACCCTCTCGCTGGGACGGCACCAGG TTTGGCCAGATCCCCTGCCAGGGATCCCGATTGTGCGCCGACCCACGGGGGGAAGGGCGGTGCTCCATCAGGCGGCTGAG GATGCAGCAGAGCTGACCTACAGCTTGGTGTTGCCCCTTTCTTACTTGCAAGCCAGGTTGCCCAGTTTGCAGCGGGCCTG GGTGTACGACTTCTGTTGCCGCTTTTGGGTGCAGGGGTTGGCGGAGCTGGGCATTGCCATAGATGAGCCCGCTTTTGCTC ACGGCCGAAGCCACCGGGATCCCGGCTACCGCAACAAGACCAGTTGCTTTGCCTCCCGTACCCGTGCTGACTTGAGCTGG CAGGGCAAAAAGCTGATGGGCAACGCCCAACTGTGGCAACCTTGGGGGATCCTGCAACAGGGATCCCTCCTATTGCAACC CAATCTAGAGCTGTGGGAACGGTATCTGCCCGGCTCGCAGGTGATTGGTATCTACGACATTTGCCCCACGGCGCCAGGGA TCCCTGCTTTGATCGAACATTTTCTCCAGGCCGCCCGGGAGTGCTTTGAAGTGGAATGGCAAGAAGAAGCCTGGCTCCCT TGGCCGGACTGA
Upstream 100 bases:
>100_bases AAATTTCCCGGGCCATCACCATTGTGGCCAGCTTGGCCGATGAATATGATGAGCCCCTCCAGGCGGAGTTCCCCAAAGTT TAAGGTCTGGCTTTGCCAGG
Downstream 100 bases:
>100_bases GGGCCGGTTGCTGTTAACAATTACTAGCAACAAGAAGCGGCTTGTCTCAACCGTTCCCCAACTTCCCTCTCTCCCTGGGA AAAGGACTGCCAGTCTAGCC
Product: biotin/lipoate A/B protein ligase family protein
Products: NA
Alternate protein names: Biotin/Lipoate A/B Protein Ligase Family Protein; Protein Ligase; Lipoate-Protein Ligase A; Biotin/Lipoate A/B Protein Ligase Family; Lipoate Protein Ligase; Lipoate-Protein Ligase A Family Protein; Lipoate-Protein Ligase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MGSQGYWLPYRVASGARQMEQDAWLLQRLRHDPHPCLRFYGWDQLTLSLGRHQVWPDPLPGIPIVRRPTGGRAVLHQAAE DAAELTYSLVLPLSYLQARLPSLQRAWVYDFCCRFWVQGLAELGIAIDEPAFAHGRSHRDPGYRNKTSCFASRTRADLSW QGKKLMGNAQLWQPWGILQQGSLLLQPNLELWERYLPGSQVIGIYDICPTAPGIPALIEHFLQAARECFEVEWQEEAWLP WPD
Sequences:
>Translated_243_residues MGSQGYWLPYRVASGARQMEQDAWLLQRLRHDPHPCLRFYGWDQLTLSLGRHQVWPDPLPGIPIVRRPTGGRAVLHQAAE DAAELTYSLVLPLSYLQARLPSLQRAWVYDFCCRFWVQGLAELGIAIDEPAFAHGRSHRDPGYRNKTSCFASRTRADLSW QGKKLMGNAQLWQPWGILQQGSLLLQPNLELWERYLPGSQVIGIYDICPTAPGIPALIEHFLQAARECFEVEWQEEAWLP WPD >Mature_242_residues GSQGYWLPYRVASGARQMEQDAWLLQRLRHDPHPCLRFYGWDQLTLSLGRHQVWPDPLPGIPIVRRPTGGRAVLHQAAED AAELTYSLVLPLSYLQARLPSLQRAWVYDFCCRFWVQGLAELGIAIDEPAFAHGRSHRDPGYRNKTSCFASRTRADLSWQ GKKLMGNAQLWQPWGILQQGSLLLQPNLELWERYLPGSQVIGIYDICPTAPGIPALIEHFLQAARECFEVEWQEEAWLPW PD
Specific function: Unknown
COG id: COG0095
COG function: function code H; Lipoate-protein ligase A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27870; Mature: 27739
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQGYWLPYRVASGARQMEQDAWLLQRLRHDPHPCLRFYGWDQLTLSLGRHQVWPDPLP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCC GIPIVRRPTGGRAVLHQAAEDAAELTYSLVLPLSYLQARLPSLQRAWVYDFCCRFWVQGL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AELGIAIDEPAFAHGRSHRDPGYRNKTSCFASRTRADLSWQGKKLMGNAQLWQPWGILQQ HHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHC GSLLLQPNLELWERYLPGSQVIGIYDICPTAPGIPALIEHFLQAARECFEVEWQEEAWLP CCEEECCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC WPD CCC >Mature Secondary Structure GSQGYWLPYRVASGARQMEQDAWLLQRLRHDPHPCLRFYGWDQLTLSLGRHQVWPDPLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCC GIPIVRRPTGGRAVLHQAAEDAAELTYSLVLPLSYLQARLPSLQRAWVYDFCCRFWVQGL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AELGIAIDEPAFAHGRSHRDPGYRNKTSCFASRTRADLSWQGKKLMGNAQLWQPWGILQQ HHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCHHHC GSLLLQPNLELWERYLPGSQVIGIYDICPTAPGIPALIEHFLQAARECFEVEWQEEAWLP CCEEECCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC WPD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA