| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is ygcG [H]
Identifier: 86608755
GI number: 86608755
Start: 1334811
End: 1336124
Strand: Reverse
Name: ygcG [H]
Synonym: CYB_1280
Alternate gene names: 86608755
Gene position: 1336124-1334811 (Counterclockwise)
Preceding gene: 86608756
Following gene: 86608754
Centisome position: 43.86
GC content: 59.28
Gene sequence:
>1314_bases TTGCTAGTTGTATTCCTGCTGCCGCAGCCCGCTTGGGCCATTACCCTTGAACAAGTGCCCAACCCCCGCCGTCAGTATGG AGGGTGGGTTTCCGATACCGCCAACATCCTCAGCAGCAGCACCGAAAACGAGCTCAACCGTCTTATCACTCAGCTTGAGC AGCGCACCAGTGCCGAGATGGCAGTGGTTACCGTGCCGAATACTCAGGGATATGCAACACCAAAAGACTTCACCACGCAG CTATTTAACTACTGGGGGATCGGCAAGGCAGGCCAAAACAACGGGGTTTTGTTTCTCATCTCGGTAGGGGATCGGCGGGT GGAAATCGAAACGGGCAGGGGCCTGGTCGCTATCCTCCCCGACAGCCGAGTCCAGCAGATTATCGACCAGCAGATCCTGC CTCGGTTTCGCAATGGGGATTTCGATGGCGGCACTCTGGCGGGGGTGCGGCAGTTGACCTCGGTGTTGCAGGGCCAGCCC GTTGCCAATGTTCCTGCGGCAGCTTCTGGAGTTACCACCTCAACGATTGCAACTTCTTCTGGGGCAGTGGCCCAGGGCAT TGATTCTTCCCTGGTGGAAGGGATCCTGCTGCTGCTGGGGATCATCATTTTGGGACTGGGGTGGCAGCGCTCTCGCATGC CCGTCTCTCTAAGGGCTGAGCGAGGGGGAAGACAAGTCCTCTCCCTGACACGCAGAGATCCAAGAACAGGTGCTGTGCTC TCTTCGGTTCAGAGCGACCCCATTCGTCTCTTCCTCTATTCGGGATCCCTCTGCCTTGGCGTGTTCCTAGGATTGTCCAG CGGCAACTGGCTGGGGTTCGCTCTGCCGGTTGTGGCTGCTATGGCCACTGACGGCACCTTGGGCCGGAAGCGTGGGATCC CTTTTCAGCCAGTGGTCTGTCAAGCCTGTGGTCGACCCATGCGCCCAATCCAGCCCCAGCTTCTGGATAAGTACCTTCCC CAAGAGCATCGCCTGGCCAGGAGCCGCGGCAGAGCTCGCTACTACGGCTGGTTTTGTCCTACCTGTCAAGGAATAGCTGT GGTTGTGCGCGAAGGCACGCTCTCCCGACACCTTTACTGCCCTCGGTGCCAAGCCCTCACCCTCGACCTCACCACACAGG TTCTCAGGGAAGCCACCTATTCCTCTAGCGGCTTGAAGCTGGAAATCCTGAGCTGTCCTATCTGCGGGTACCGCAGCGAG CGAGAGGTGGTCATCCCCGAGCTCAGCGACACAGACACAGATTCAGACTTCGGTGGAGATTCAGACTTCGGTGGCGGCAG CAGCGGAGGTGGCGGAGCGGGCGGCAGTTGGTGA
Upstream 100 bases:
>100_bases TCTCCCTGGGAAAAGGACTGCCAGTCTAGCCGAGACAGCTGTGCTAGAACCTAGGCAGCGCTCAGCCAGGTAAGCCATGC CGAAAGTTTGGGCGGCAGTT
Downstream 100 bases:
>100_bases GACCCAACTCTAGAGATTTCTCTATCGATCTGAAAAAGGAGTCGGGCTTCTCTTAAATCCGCCAGGACAGTACAGTGGTA AGGGAGCAGCAATAGAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MLVVFLLPQPAWAITLEQVPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQ LFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQP VANVPAAASGVTTSTIATSSGAVAQGIDSSLVEGILLLLGIIILGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVL SSVQSDPIRLFLYSGSLCLGVFLGLSSGNWLGFALPVVAAMATDGTLGRKRGIPFQPVVCQACGRPMRPIQPQLLDKYLP QEHRLARSRGRARYYGWFCPTCQGIAVVVREGTLSRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSE REVVIPELSDTDTDSDFGGDSDFGGGSSGGGGAGGSW
Sequences:
>Translated_437_residues MLVVFLLPQPAWAITLEQVPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQ LFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQP VANVPAAASGVTTSTIATSSGAVAQGIDSSLVEGILLLLGIIILGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVL SSVQSDPIRLFLYSGSLCLGVFLGLSSGNWLGFALPVVAAMATDGTLGRKRGIPFQPVVCQACGRPMRPIQPQLLDKYLP QEHRLARSRGRARYYGWFCPTCQGIAVVVREGTLSRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSE REVVIPELSDTDTDSDFGGDSDFGGGSSGGGGAGGSW >Mature_437_residues MLVVFLLPQPAWAITLEQVPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEMAVVTVPNTQGYATPKDFTTQ LFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILPDSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQP VANVPAAASGVTTSTIATSSGAVAQGIDSSLVEGILLLLGIIILGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVL SSVQSDPIRLFLYSGSLCLGVFLGLSSGNWLGFALPVVAAMATDGTLGRKRGIPFQPVVCQACGRPMRPIQPQLLDKYLP QEHRLARSRGRARYYGWFCPTCQGIAVVVREGTLSRHLYCPRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSE REVVIPELSDTDTDSDFGGDSDFGGGSSGGGGAGGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=141, Percent_Identity=28.3687943262411, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 47000; Mature: 47000
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVFLLPQPAWAITLEQVPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEM CEEEEEECCCCEEEEHHHCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE AVVTVPNTQGYATPKDFTTQLFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILP EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEECC DSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQPVANVPAAASGVTTSTIATSS CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCC GAVAQGIDSSLVEGILLLLGIIILGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVL CCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHH SSVQSDPIRLFLYSGSLCLGVFLGLSSGNWLGFALPVVAAMATDGTLGRKRGIPFQPVVC HHCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QACGRPMRPIQPQLLDKYLPQEHRLARSRGRARYYGWFCPTCQGIAVVVREGTLSRHLYC HHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEC PRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFGGD CCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCC SDFGGGSSGGGGAGGSW CCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVVFLLPQPAWAITLEQVPNPRRQYGGWVSDTANILSSSTENELNRLITQLEQRTSAEM CEEEEEECCCCEEEEHHHCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE AVVTVPNTQGYATPKDFTTQLFNYWGIGKAGQNNGVLFLISVGDRRVEIETGRGLVAILP EEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEECC DSRVQQIIDQQILPRFRNGDFDGGTLAGVRQLTSVLQGQPVANVPAAASGVTTSTIATSS CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCC GAVAQGIDSSLVEGILLLLGIIILGLGWQRSRMPVSLRAERGGRQVLSLTRRDPRTGAVL CCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCHHHH SSVQSDPIRLFLYSGSLCLGVFLGLSSGNWLGFALPVVAAMATDGTLGRKRGIPFQPVVC HHCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH QACGRPMRPIQPQLLDKYLPQEHRLARSRGRARYYGWFCPTCQGIAVVVREGTLSRHLYC HHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEC PRCQALTLDLTTQVLREATYSSSGLKLEILSCPICGYRSEREVVIPELSDTDTDSDFGGD CCCCEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCC SDFGGGSSGGGGAGGSW CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]