| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608757
Identifier: 86608757
GI number: 86608757
Start: 1337043
End: 1337507
Strand: Reverse
Name: 86608757
Synonym: CYB_1282
Alternate gene names: NA
Gene position: 1337507-1337043 (Counterclockwise)
Preceding gene: 86608759
Following gene: 86608756
Centisome position: 43.9
GC content: 56.13
Gene sequence:
>465_bases ATGGTCTACAGTGAGCCGCTCATGAGCACCTTTAACCCTTCGCCAGAGGTTTTTCCAGAGTCCGTTCGCTACGTTGAGGT TGTCTCGGCGGTGGTTTCCAGCCTCAAGGAGGATGCCGCCTACGAGAACCACGAGCAAGGTCACACCTGGAAATTCACCT ACGGCACGGCAGAAGTGTTCGTCCATCTGAGCGGCGAATCCCCAGAAGACACTCTTTTGGTATGGTCTCCCGTTCTCTCT CTGCCGGTGGCAGAACCGGCCAAGCTGATGCAGAAGCTCCTGGAGAAGAATTGGAGCGACACCCTAGAGGCGCGCTTTTG CATCTGGAACAACCAGGTGGTGCTGAACCACTACCGCACCTTGGAAGGGATCACAGCGGGCGAAATTTCCCGGGCCATCA CCATTGTGGCCAGCTTGGCCGATGAATATGATGAGCCCCTCCAGGCGGAGTTCCCCAAAGTTTAA
Upstream 100 bases:
>100_bases GCCTGAGTTGAGGATCCCAAAGCGATGACCGGATAGGTCGGAGTCTTAGGCGGTATAGCGGTATAGTTGAGGTGGTTGGA TAGGGAATAGGGGGAAGACC
Downstream 100 bases:
>100_bases GGTCTGGCTTTGCCAGGATGGGATCCCAGGGATACTGGCTCCCCTACCGCGTGGCCTCTGGGGCCCGGCAAATGGAGCAG GATGCCTGGCTTCTGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVYSEPLMSTFNPSPEVFPESVRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGTAEVFVHLSGESPEDTLLVWSPVLS LPVAEPAKLMQKLLEKNWSDTLEARFCIWNNQVVLNHYRTLEGITAGEISRAITIVASLADEYDEPLQAEFPKV
Sequences:
>Translated_154_residues MVYSEPLMSTFNPSPEVFPESVRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGTAEVFVHLSGESPEDTLLVWSPVLS LPVAEPAKLMQKLLEKNWSDTLEARFCIWNNQVVLNHYRTLEGITAGEISRAITIVASLADEYDEPLQAEFPKV >Mature_154_residues MVYSEPLMSTFNPSPEVFPESVRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGTAEVFVHLSGESPEDTLLVWSPVLS LPVAEPAKLMQKLLEKNWSDTLEARFCIWNNQVVLNHYRTLEGITAGEISRAITIVASLADEYDEPLQAEFPKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17348; Mature: 17348
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYSEPLMSTFNPSPEVFPESVRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGTAEVF CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEE VHLSGESPEDTLLVWSPVLSLPVAEPAKLMQKLLEKNWSDTLEARFCIWNNQVVLNHYRT EEECCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCEEEEHHHHH LEGITAGEISRAITIVASLADEYDEPLQAEFPKV HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVYSEPLMSTFNPSPEVFPESVRYVEVVSAVVSSLKEDAAYENHEQGHTWKFTYGTAEVF CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEE VHLSGESPEDTLLVWSPVLSLPVAEPAKLMQKLLEKNWSDTLEARFCIWNNQVVLNHYRT EEECCCCCCCEEEEECHHHHCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCEEEEHHHHH LEGITAGEISRAITIVASLADEYDEPLQAEFPKV HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA