Click here to switch to the map view.

The map label for this gene is ndhG [H]

Identifier: 86608754

GI number: 86608754

Start: 1334083

End: 1334691

Strand: Reverse

Name: ndhG [H]

Synonym: CYB_1279

Alternate gene names: 86608754

Gene position: 1334691-1334083 (Counterclockwise)

Preceding gene: 86608755

Following gene: 86608753

Centisome position: 43.81

GC content: 57.14

Gene sequence:

>609_bases
ATGACCCTCGGAGAAGGCGTACAACTGGTTACGTTTGTGGTGCTATCGGCGATGGCCATTGGCTTCGCGCTAGGCGTGGT
TTGGGCCCCCAGCATTGTCTATTCCGGTTTTCTGCTCGGGGGCGTTTTCCTGAGCATGGCCGGGTTGTATCTCCTCTTGA
ATGCCGATTTTGTGGCCGCAGCCCAAGTTCTGATCTACGTCGGCGCGGTTAATGTGTTGATCCTGTTTGCCATCATGTTG
GTGAATCGGCGCTACAACTTTGCTCCTCTGAAGCTGGGCTGGCTGCGCAACGGAGTGACGGCGGTGGTCTGTTTGGGTCT
GTTTGCCCTTCTAGCCGCGATGGCTTTGAACACCCCTTGGCCGCTGCAGCCGATCCAACCTTTGAGCAGTGTGTTGGTGA
TCGGCGGCCACTTCTTCAGCGATTATCTTCTGCCTTTTGAGCTGGCTTCTGTTTTGCTGCTGATGGCGTTGATTGGGGCC
ATTGTCTTGGCGCGGCGGGAGTTTGTTCTTCCCCAAGCCGGAGAAGGGGATCTGAGCTTGCTGGAGCGGGCCCGACCCCA
GCTTGAATCAGAGTCAGAACGACCGGCAGAGCTGGTGAGCACCCGTTGA

Upstream 100 bases:

>100_bases
CTCTATCGATCTGAAAAAGGAGTCGGGCTTCTCTTAAATCCGCCAGGACAGTACAGTGGTAAGGGAGCAGCAATAGAAAC
TGGCTAAGGACGGATCTCTC

Downstream 100 bases:

>100_bases
AGCTACCTGCTCTCGATCACAAAATCCAGAGTTTTCCCAGTGCCCTTCTCATTGCGTATCTACTGGAGCCTATCGCGATG
TTGCAACTGCAGTTTTTCTT

Product: NADH dehydrogenase subunit J

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I, chain 6; NDH-1, chain 6 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTLGEGVQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAAAQVLIYVGAVNVLILFAIML
VNRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPWPLQPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGA
IVLARREFVLPQAGEGDLSLLERARPQLESESERPAELVSTR

Sequences:

>Translated_202_residues
MTLGEGVQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAAAQVLIYVGAVNVLILFAIML
VNRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPWPLQPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGA
IVLARREFVLPQAGEGDLSLLERARPQLESESERPAELVSTR
>Mature_201_residues
TLGEGVQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAAAQVLIYVGAVNVLILFAIMLV
NRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPWPLQPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGAI
VLARREFVLPQAGEGDLSLLERARPQLESESERPAELVSTR

Specific function: NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton tran

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: 1.6.5.3

Molecular weight: Translated: 21703; Mature: 21572

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGEGVQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AQVLIYVGAVNVLILFAIMLVNRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLQPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGAIVLARREFVLPQAGEGDLSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LERARPQLESESERPAELVSTR
HHHHHHCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TLGEGVQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AQVLIYVGAVNVLILFAIMLVNRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPW
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLQPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGAIVLARREFVLPQAGEGDLSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LERARPQLESESERPAELVSTR
HHHHHHCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA