Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608652

Identifier: 86608652

GI number: 86608652

Start: 1213522

End: 1214304

Strand: Direct

Name: 86608652

Synonym: CYB_1176

Alternate gene names: NA

Gene position: 1213522-1214304 (Clockwise)

Preceding gene: 86608651

Following gene: 86608653

Centisome position: 39.83

GC content: 57.73

Gene sequence:

>783_bases
GTGCTGCGCTATTTGCGGATATTGTGGCTGTTTTGGAGCACCTCAATCGCGGCAGAAATGGAGTACCGTGCCAATTTTTT
CTTTGCCAGCCTCAGCAGTCTGGGTGGCTTGGGATCCGCTCTGTTTGGGCTGTCGTTGTTTTACCAGCAGGGGCACTGGC
TGGGCGGTTGGAGTTGGCCGGAAGCCCTCATCGTGTTGGGGGTGTTCACCATTCTGCAGGGGGTGTCGGCCAGTCTCTTT
AACGTCAACCTCAATCGCATTGTGCAGCAGGTGCAGGAAGGCACCTTGGATTTTGTTTTGCTAAAGCCAATAAGCAGCCA
GTTTTGGCTGTCGGCCAGGGTGTTTTCCCCCTGGGGCCTGGTGGATATCGGCTTTGGCCTGTTGCTGATTCTCTACGCCG
GGATCCAGCTCCATTTGCCTGCTTGGGCCTATGCTCTGGGGCTGCTGCCTCTGCTGCTGGGGCTGATCATCCTCTACAGC
CTCTGGTTTATGTTGGGAGCCACCAGCATTTGGTTTGTGAAAATCTACAACGTCACCGAGGTGCTGCGGGGCCTAGTAGA
GGCAGGACGATTTCCGATAGTGGCCTATCCGGTGGCCTACCGCGTGTTTTTCACCTTCGTCGTGCCGGTGGCTTTCCTGA
CCACCATCCCGGCGGAGACCCTGCTGGGGCGAGCCCAATGGCCGTGGCTGCTGGGATCCGCTCTGCTGGCGGCAGGGCTG
TTGTGGGGATCCCATCTCTTCTGGCGCTTTGCCCTGCGCTTTTACACCAGCGCTTCCAGTTAA

Upstream 100 bases:

>100_bases
AGGTGCTGCAAAGCTGTTTTTTGGAGGTGTTTCACCCCTATTTCATTACCGCCCGCTGTTACCGCAAGTGGGATAAAAGC
TGAGATTGGAGAAAACCAAG

Downstream 100 bases:

>100_bases
AGTCTGGGCCAAAAAGCTTGGATCCCACGCATCCGAGTTTCCAGGAGTTGAGTAATTTCTACAGACGCGCCCCATGCGCT
GCCATCGCAGAGAACAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLRYLRILWLFWSTSIAAEMEYRANFFFASLSSLGGLGSALFGLSLFYQQGHWLGGWSWPEALIVLGVFTILQGVSASLF
NVNLNRIVQQVQEGTLDFVLLKPISSQFWLSARVFSPWGLVDIGFGLLLILYAGIQLHLPAWAYALGLLPLLLGLIILYS
LWFMLGATSIWFVKIYNVTEVLRGLVEAGRFPIVAYPVAYRVFFTFVVPVAFLTTIPAETLLGRAQWPWLLGSALLAAGL
LWGSHLFWRFALRFYTSASS

Sequences:

>Translated_260_residues
MLRYLRILWLFWSTSIAAEMEYRANFFFASLSSLGGLGSALFGLSLFYQQGHWLGGWSWPEALIVLGVFTILQGVSASLF
NVNLNRIVQQVQEGTLDFVLLKPISSQFWLSARVFSPWGLVDIGFGLLLILYAGIQLHLPAWAYALGLLPLLLGLIILYS
LWFMLGATSIWFVKIYNVTEVLRGLVEAGRFPIVAYPVAYRVFFTFVVPVAFLTTIPAETLLGRAQWPWLLGSALLAAGL
LWGSHLFWRFALRFYTSASS
>Mature_260_residues
MLRYLRILWLFWSTSIAAEMEYRANFFFASLSSLGGLGSALFGLSLFYQQGHWLGGWSWPEALIVLGVFTILQGVSASLF
NVNLNRIVQQVQEGTLDFVLLKPISSQFWLSARVFSPWGLVDIGFGLLLILYAGIQLHLPAWAYALGLLPLLLGLIILYS
LWFMLGATSIWFVKIYNVTEVLRGLVEAGRFPIVAYPVAYRVFFTFVVPVAFLTTIPAETLLGRAQWPWLLGSALLAAGL
LWGSHLFWRFALRFYTSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29200; Mature: 29200

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYLRILWLFWSTSIAAEMEYRANFFFASLSSLGGLGSALFGLSLFYQQGHWLGGWSWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH
EALIVLGVFTILQGVSASLFNVNLNRIVQQVQEGTLDFVLLKPISSQFWLSARVFSPWGL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHEEEEEECCCCCH
VDIGFGLLLILYAGIQLHLPAWAYALGLLPLLLGLIILYSLWFMLGATSIWFVKIYNVTE
HHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
VLRGLVEAGRFPIVAYPVAYRVFFTFVVPVAFLTTIPAETLLGRAQWPWLLGSALLAAGL
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH
LWGSHLFWRFALRFYTSASS
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRYLRILWLFWSTSIAAEMEYRANFFFASLSSLGGLGSALFGLSLFYQQGHWLGGWSWP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHH
EALIVLGVFTILQGVSASLFNVNLNRIVQQVQEGTLDFVLLKPISSQFWLSARVFSPWGL
HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHEEEEEECCCCCH
VDIGFGLLLILYAGIQLHLPAWAYALGLLPLLLGLIILYSLWFMLGATSIWFVKIYNVTE
HHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
VLRGLVEAGRFPIVAYPVAYRVFFTFVVPVAFLTTIPAETLLGRAQWPWLLGSALLAAGL
HHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHH
LWGSHLFWRFALRFYTSASS
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA