| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608651
Identifier: 86608651
GI number: 86608651
Start: 1212761
End: 1213504
Strand: Direct
Name: 86608651
Synonym: CYB_1175
Alternate gene names: NA
Gene position: 1212761-1213504 (Clockwise)
Preceding gene: 86608650
Following gene: 86608652
Centisome position: 39.81
GC content: 56.32
Gene sequence:
>744_bases GTGCCCCCCATCCCACCTGCTCTGAGCGGCTACTGGCAAAATGCCTTTGACCTAGAAGCCCATCTGGGATCCTTCCTGGG CCTTGGGGCTGCCGATCTGCGGGAGAAACTGCGGGCAGGGCAGCAGCAATTGGCGGAGTTGGGCCGGCGAGACTTTGGCT GGGATCGGGCAGATGCGTTTTATCGGGATCAGGTGAGATCCGCCTATCTGCTGGATTTGGCGGCTTGGCACCTGAGCAGC ACCGACTACATCGGCGATACCTTACGCCTGGTGGCGGATCATGCCCGCGGGTTGGTGTTGGATTTTGGCGGCGGCATCGG CACCCATGCTATCGGGGCGGCCCTCTGCGCAGCGGTGGATCAGGTGATCTTCTGGGATATCAACCCCATCCATCGGCAGT TTGTGCAATGGCGGGCGGAAAAGCTGGGCTTAACTGAGCGCATCCACTGTCCAGAAAACTTCCCAGAAGAGATCTTTTTT GACACGGTCATCTGCTTCGATGTGGTGGAACATCTGGCGGATCCGGCAGCGCAGTTGCGGCAGTTTTACGACTGGCTCAA GCCGTCAGGTAAGCTTTTGATCAACTGGTACTTTTTCAAGGGGTTTAACGGCGAGTTTCCTTTTCACCTGGACGACCCGC AAAAGGTAGAGCAATTCTTTCAGGTGCTGCAAAGCTGTTTTTTGGAGGTGTTTCACCCCTATTTCATTACCGCCCGCTGT TACCGCAAGTGGGATAAAAGCTGA
Upstream 100 bases:
>100_bases TAATAAAGACACGGAGCCGAACCCGGAAAACCTGGCTCAGCCAGAGGAAGAGGATTTCACTGTTGCCTAAGCCAACCCAA CCAGTCTTCTGAATCCTCCT
Downstream 100 bases:
>100_bases GATTGGAGAAAACCAAGGTGCTGCGCTATTTGCGGATATTGTGGCTGTTTTGGAGCACCTCAATCGCGGCAGAAATGGAG TACCGTGCCAATTTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPPIPPALSGYWQNAFDLEAHLGSFLGLGAADLREKLRAGQQQLAELGRRDFGWDRADAFYRDQVRSAYLLDLAAWHLSS TDYIGDTLRLVADHARGLVLDFGGGIGTHAIGAALCAAVDQVIFWDINPIHRQFVQWRAEKLGLTERIHCPENFPEEIFF DTVICFDVVEHLADPAAQLRQFYDWLKPSGKLLINWYFFKGFNGEFPFHLDDPQKVEQFFQVLQSCFLEVFHPYFITARC YRKWDKS
Sequences:
>Translated_247_residues MPPIPPALSGYWQNAFDLEAHLGSFLGLGAADLREKLRAGQQQLAELGRRDFGWDRADAFYRDQVRSAYLLDLAAWHLSS TDYIGDTLRLVADHARGLVLDFGGGIGTHAIGAALCAAVDQVIFWDINPIHRQFVQWRAEKLGLTERIHCPENFPEEIFF DTVICFDVVEHLADPAAQLRQFYDWLKPSGKLLINWYFFKGFNGEFPFHLDDPQKVEQFFQVLQSCFLEVFHPYFITARC YRKWDKS >Mature_246_residues PPIPPALSGYWQNAFDLEAHLGSFLGLGAADLREKLRAGQQQLAELGRRDFGWDRADAFYRDQVRSAYLLDLAAWHLSST DYIGDTLRLVADHARGLVLDFGGGIGTHAIGAALCAAVDQVIFWDINPIHRQFVQWRAEKLGLTERIHCPENFPEEIFFD TVICFDVVEHLADPAAQLRQFYDWLKPSGKLLINWYFFKGFNGEFPFHLDDPQKVEQFFQVLQSCFLEVFHPYFITARCY RKWDKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28434; Mature: 28302
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPIPPALSGYWQNAFDLEAHLGSFLGLGAADLREKLRAGQQQLAELGRRDFGWDRADAF CCCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YRDQVRSAYLLDLAAWHLSSTDYIGDTLRLVADHARGLVLDFGGGIGTHAIGAALCAAVD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH QVIFWDINPIHRQFVQWRAEKLGLTERIHCPENFPEEIFFDTVICFDVVEHLADPAAQLR HHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH QFYDWLKPSGKLLINWYFFKGFNGEFPFHLDDPQKVEQFFQVLQSCFLEVFHPYFITARC HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKWDKS HHHHCCC >Mature Secondary Structure PPIPPALSGYWQNAFDLEAHLGSFLGLGAADLREKLRAGQQQLAELGRRDFGWDRADAF CCCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YRDQVRSAYLLDLAAWHLSSTDYIGDTLRLVADHARGLVLDFGGGIGTHAIGAALCAAVD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH QVIFWDINPIHRQFVQWRAEKLGLTERIHCPENFPEEIFFDTVICFDVVEHLADPAAQLR HHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHH QFYDWLKPSGKLLINWYFFKGFNGEFPFHLDDPQKVEQFFQVLQSCFLEVFHPYFITARC HHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRKWDKS HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA