Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608152

Identifier: 86608152

GI number: 86608152

Start: 679816

End: 680487

Strand: Reverse

Name: 86608152

Synonym: CYB_0666

Alternate gene names: NA

Gene position: 680487-679816 (Counterclockwise)

Preceding gene: 86608153

Following gene: 86608149

Centisome position: 22.34

GC content: 58.78

Gene sequence:

>672_bases
ATGGGCCTGGCCCAGCAGCTTGCTTGCTATGCTCTCTGGCTGGCCGCCGTATTTGCTTTTGCGGAATGGCTGCGCTCCCG
GCAGGTGGACGGGGAATGGGTGCGCAAGGCCATTCACATTGGTGTGGGCAATATCATTTTGTTGGCTTGGGCTTTGCAAG
TGCCTCGCTGGCTAGGGGTGGGATTCTCTCTGGTGTTTGCCGGCTTGGCGCTGCTCTCCTACCGGGTGGCCATCTTGCCC
AGCTTGAATGGAGTCGGTCGCCGCAGCTTTGGCACCTGTTTCTACGCCGTCAGCATTGGCCTGCTGCTGTTTTGGTTTTG
GCGTCCCCAGCGACAGGTCTTCGCGGTGATCGGCATATTGGTGATGACGTGGGCCGACGCCTTGGCAGGGTTAGTGGGCA
AAACTTGGGGCAAACACCCCTACCAACTGGGATCCATTCAAAAAAGCTGGGAGGGATCCCTGACCATGTGGGCGGTGAGC
AGCTTGGTGATCGCGGCTCTGCTGCTGGGGTACTTTGGCTTCTCCCCCCCTTTGCTGGCCATCAGCCTCTTGGTGGGGGG
GATAACCATGGGGTTGGAGGTGTTCTCTTGGTGGGGGTTGGATAACCTGACCGTGCCCCTGGCCAGTGCCGGCCTCTGTT
TTGTTCTGCTGCAGATCCTCAACTATTTGTAA

Upstream 100 bases:

>100_bases
GGTGACCGGTGGCAAAACGCCTCCCATGCCCCAGTTCCAGCCGGATCCTCAGGAGATGGCAGATCTGCTCAGCTACTTGA
AAACCCTCTGAGGCCGTTTC

Downstream 100 bases:

>100_bases
CGCTTGCTACGGAACGTTCCTCTCCGGTTCCCGGCGGTATAGTGTGGAAACAGCCCTTGCTTCTCTTCGCCATGGCTGCA
AGTCCTGCGCTGGCCTCTTC

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: Dolichol Kinase

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILP
SLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVS
SLVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL

Sequences:

>Translated_223_residues
MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILP
SLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVS
SLVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL
>Mature_222_residues
GLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILPS
LNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSS
LVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL

Specific function: Unknown

COG id: COG0170

COG function: function code I; Dolichol kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24477; Mature: 24346

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GFSLVFAGLALLSYRVAILPSLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGIL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSSLVIAALLLGYFGFSPPLLA
HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
ISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GFSLVFAGLALLSYRVAILPSLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGIL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSSLVIAALLLGYFGFSPPLLA
HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
ISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA