| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608152
Identifier: 86608152
GI number: 86608152
Start: 679816
End: 680487
Strand: Reverse
Name: 86608152
Synonym: CYB_0666
Alternate gene names: NA
Gene position: 680487-679816 (Counterclockwise)
Preceding gene: 86608153
Following gene: 86608149
Centisome position: 22.34
GC content: 58.78
Gene sequence:
>672_bases ATGGGCCTGGCCCAGCAGCTTGCTTGCTATGCTCTCTGGCTGGCCGCCGTATTTGCTTTTGCGGAATGGCTGCGCTCCCG GCAGGTGGACGGGGAATGGGTGCGCAAGGCCATTCACATTGGTGTGGGCAATATCATTTTGTTGGCTTGGGCTTTGCAAG TGCCTCGCTGGCTAGGGGTGGGATTCTCTCTGGTGTTTGCCGGCTTGGCGCTGCTCTCCTACCGGGTGGCCATCTTGCCC AGCTTGAATGGAGTCGGTCGCCGCAGCTTTGGCACCTGTTTCTACGCCGTCAGCATTGGCCTGCTGCTGTTTTGGTTTTG GCGTCCCCAGCGACAGGTCTTCGCGGTGATCGGCATATTGGTGATGACGTGGGCCGACGCCTTGGCAGGGTTAGTGGGCA AAACTTGGGGCAAACACCCCTACCAACTGGGATCCATTCAAAAAAGCTGGGAGGGATCCCTGACCATGTGGGCGGTGAGC AGCTTGGTGATCGCGGCTCTGCTGCTGGGGTACTTTGGCTTCTCCCCCCCTTTGCTGGCCATCAGCCTCTTGGTGGGGGG GATAACCATGGGGTTGGAGGTGTTCTCTTGGTGGGGGTTGGATAACCTGACCGTGCCCCTGGCCAGTGCCGGCCTCTGTT TTGTTCTGCTGCAGATCCTCAACTATTTGTAA
Upstream 100 bases:
>100_bases GGTGACCGGTGGCAAAACGCCTCCCATGCCCCAGTTCCAGCCGGATCCTCAGGAGATGGCAGATCTGCTCAGCTACTTGA AAACCCTCTGAGGCCGTTTC
Downstream 100 bases:
>100_bases CGCTTGCTACGGAACGTTCCTCTCCGGTTCCCGGCGGTATAGTGTGGAAACAGCCCTTGCTTCTCTTCGCCATGGCTGCA AGTCCTGCGCTGGCCTCTTC
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: Dolichol Kinase
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILP SLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVS SLVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL
Sequences:
>Translated_223_residues MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILP SLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVS SLVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL >Mature_222_residues GLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGVGFSLVFAGLALLSYRVAILPS LNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGILVMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSS LVIAALLLGYFGFSPPLLAISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24477; Mature: 24346
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH GFSLVFAGLALLSYRVAILPSLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGIL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSSLVIAALLLGYFGFSPPLLA HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GLAQQLACYALWLAAVFAFAEWLRSRQVDGEWVRKAIHIGVGNIILLAWALQVPRWLGV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH GFSLVFAGLALLSYRVAILPSLNGVGRRSFGTCFYAVSIGLLLFWFWRPQRQVFAVIGIL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VMTWADALAGLVGKTWGKHPYQLGSIQKSWEGSLTMWAVSSLVIAALLLGYFGFSPPLLA HHHHHHHHHHHHHHHCCCCCCHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH ISLLVGGITMGLEVFSWWGLDNLTVPLASAGLCFVLLQILNYL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA