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The map label for this gene is cytM [H]

Identifier: 86608153

GI number: 86608153

Start: 680497

End: 680868

Strand: Reverse

Name: cytM [H]

Synonym: CYB_0667

Alternate gene names: 86608153

Gene position: 680868-680497 (Counterclockwise)

Preceding gene: 86608154

Following gene: 86608152

Centisome position: 22.35

GC content: 59.14

Gene sequence:

>372_bases
TTGCAGCGATTCTTTACAAGTGTCTGGGCTCAGAAAACTCGGCTGGGTCTTGCCCTCCTCGGCCTAGGGCTGGCGATATT
GACCTGGGCTTGGCTAAGTGCTGAGGCTCGTCTGGATCCCTACACGGAAGCCGTCCTCAGCTTACAGGGGCAGGTTAGCC
ATGGTGCATCCTTGTTTGCCCTCAACTGTGCAGCCTGCCACGGAGAAGAAGCGGATGGGCGAGTGGGGCCCAGTCTGCGG
GGGGTGAGCAGCCGCCGCTCGGATCGGTTTATTATTCAGCAGGTGACCGGTGGCAAAACGCCTCCCATGCCCCAGTTCCA
GCCGGATCCTCAGGAGATGGCAGATCTGCTCAGCTACTTGAAAACCCTCTGA

Upstream 100 bases:

>100_bases
ATCCTGCAGCAGCCAGTCGTCAACTGGCAGTTGGGTTGAGTTTGAGCAAAAGCGACTTCAACCTCCATCCCAACAGCGTT
TACAACCCTTCCTCAAATCC

Downstream 100 bases:

>100_bases
GGCCGTTTCATGGGCCTGGCCCAGCAGCTTGCTTGCTATGCTCTCTGGCTGGCCGCCGTATTTGCTTTTGCGGAATGGCT
GCGCTCCCGGCAGGTGGACG

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQRFFTSVWAQKTRLGLALLGLGLAILTWAWLSAEARLDPYTEAVLSLQGQVSHGASLFALNCAACHGEEADGRVGPSLR
GVSSRRSDRFIIQQVTGGKTPPMPQFQPDPQEMADLLSYLKTL

Sequences:

>Translated_123_residues
MQRFFTSVWAQKTRLGLALLGLGLAILTWAWLSAEARLDPYTEAVLSLQGQVSHGASLFALNCAACHGEEADGRVGPSLR
GVSSRRSDRFIIQQVTGGKTPPMPQFQPDPQEMADLLSYLKTL
>Mature_123_residues
MQRFFTSVWAQKTRLGLALLGLGLAILTWAWLSAEARLDPYTEAVLSLQGQVSHGASLFALNCAACHGEEADGRVGPSLR
GVSSRRSDRFIIQQVTGGKTPPMPQFQPDPQEMADLLSYLKTL

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13417; Mature: 13417

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFFTSVWAQKTRLGLALLGLGLAILTWAWLSAEARLDPYTEAVLSLQGQVSHGASLFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEE
LNCAACHGEEADGRVGPSLRGVSSRRSDRFIIQQVTGGKTPPMPQFQPDPQEMADLLSYL
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
KTL
HCC
>Mature Secondary Structure
MQRFFTSVWAQKTRLGLALLGLGLAILTWAWLSAEARLDPYTEAVLSLQGQVSHGASLFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEE
LNCAACHGEEADGRVGPSLRGVSSRRSDRFIIQQVTGGKTPPMPQFQPDPQEMADLLSYL
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
KTL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]