| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608142
Identifier: 86608142
GI number: 86608142
Start: 669015
End: 669383
Strand: Reverse
Name: 86608142
Synonym: CYB_0654
Alternate gene names: NA
Gene position: 669383-669015 (Counterclockwise)
Preceding gene: 86608143
Following gene: 86608141
Centisome position: 21.97
GC content: 53.93
Gene sequence:
>369_bases ATGGCGGAGCAACATAAGCCTCTGAAGAGCCTGGAAAATCAAATGGAACGGGCTGTTCTGGAGATGGTCAATGAAATCCT GCTGATGGAGAGTCAACAGCGCTACTGCTTCTGCGAGAAATTCTGTAACGATGCTGCCGCCCTGGCTTTGAACAACCTCC AGCCTCGATACGCCACCAGTTTTCACGGCTCTCTCCGAACTTTAGAAGCCATTCAAGCGGATCAGGAGTTGCAGAGGCTG ATCCGGTTGGAGGTGGTGAAGGCCATGGACAAGGTGGCGGCCAATCCCCGTTGCCCAGAACCTGAATGTCCTTTGCTGCT GCGCGACGTCGAGGCGATAGAGTTAGAACTGGCCCCTAGCGACAATTGA
Upstream 100 bases:
>100_bases GTCAACAGAGAGTAGAGCAGCATCGAAGGTAATCGAGGGCACTCCTGATCACTGAAAACAGTGACTTGGCGGCGGATTCG GTTCCCATTGGGAGGTAGCG
Downstream 100 bases:
>100_bases AGGAATGGCTCTGATGGAGCTGCGCTCCGCTAGCGCGAACGTTTCCCCTTCGCCAGTGGCCTTCCTCGGCCCTGCTGGAA CCTACACAGAGTTAGCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAEQHKPLKSLENQMERAVLEMVNEILLMESQQRYCFCEKFCNDAAALALNNLQPRYATSFHGSLRTLEAIQADQELQRL IRLEVVKAMDKVAANPRCPEPECPLLLRDVEAIELELAPSDN
Sequences:
>Translated_122_residues MAEQHKPLKSLENQMERAVLEMVNEILLMESQQRYCFCEKFCNDAAALALNNLQPRYATSFHGSLRTLEAIQADQELQRL IRLEVVKAMDKVAANPRCPEPECPLLLRDVEAIELELAPSDN >Mature_121_residues AEQHKPLKSLENQMERAVLEMVNEILLMESQQRYCFCEKFCNDAAALALNNLQPRYATSFHGSLRTLEAIQADQELQRLI RLEVVKAMDKVAANPRCPEPECPLLLRDVEAIELELAPSDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13912; Mature: 13781
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQHKPLKSLENQMERAVLEMVNEILLMESQQRYCFCEKFCNDAAALALNNLQPRYATS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHH FHGSLRTLEAIQADQELQRLIRLEVVKAMDKVAANPRCPEPECPLLLRDVEAIELELAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCC DN CC >Mature Secondary Structure AEQHKPLKSLENQMERAVLEMVNEILLMESQQRYCFCEKFCNDAAALALNNLQPRYATS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCCCHHHHH FHGSLRTLEAIQADQELQRLIRLEVVKAMDKVAANPRCPEPECPLLLRDVEAIELELAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEECCCC DN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA