| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is pheA [H]
Identifier: 86608141
GI number: 86608141
Start: 668015
End: 669001
Strand: Reverse
Name: pheA [H]
Synonym: CYB_0653
Alternate gene names: 86608141
Gene position: 669001-668015 (Counterclockwise)
Preceding gene: 86608142
Following gene: 86608139
Centisome position: 21.96
GC content: 59.88
Gene sequence:
>987_bases ATGGAGCTGCGCTCCGCTAGCGCGAACGTTTCCCCTTCGCCAGTGGCCTTCCTCGGCCCTGCTGGAACCTACACAGAGTT AGCAGCTCTGCTGGCCTGCCCTGAGCAGCCTCACCTGCACAGCCAGGGATCCCACCCCTTAGTGCCTTATCCAACGATCA GCGCCTGTCTAGAGGCGGTAGCTGCCGGCCAGCAACAATGGGCGGTGGTGCCGGTGGAAAACTCGGTGGAGGGGGGGGTC TCGATGACCTTAGACGCCCTCTGGCAACTGGAGGGGCTAGGGATTCGGCAGGCGCTGATCCTGCCCATTCGCCATGCCCT CATCGGACGTGCCTCGCGGTTGGAGCAAATTGAGCAGGTCTACTCCCACCCGCAAGCTTTGGCCCAATGTCAGGCTTGGC TGAGATCCCATCTGCCCCAGGCCACTTTGATCCCAACCCGCTCGACCACCGAAGAATTGGATCGCCTGCAGGAGCAGCCC AGCGCTGCCGTCATCGCCTCAGAACGAGCTGCCACCCTCTACCAACTGCCGGTCTTGGCCTGCCCGATCAACGATCACCC CGACAATTGCACTCGCTTTTGGGTTATTGGCCGTGCGCCGCTCTCGCGTTCCGGTCAACAGGGTGAAACCTCTGCCGATC CTGCTTCTCCGGGGGGATCCCATACTTCCTTAGCCTTCAGCCTCCCCCACAACGTGCCGGGAGCGCTGCTGAAACCTCTG CAAGTGTTTGCGGAGCGAGGCCTGAATATGTCTCGCATTGAGTCGCGCCCCACTAAAAAATCGGCAGGGACGTATGTCTT TTTTGTCGATTTGGAGAACCCTATCGGCCAACCCTATTTGGATGCCGAGGTGGTTGCGGCGCTGGAATCAATTGCTGAAA CCTTGAAGCTCTTCGGCAGCTACCCTGTGCATGACCTCTGCAAACAAGGGGATCTATCCCAAGTAGCAAAAGCCCTGCCC TCTGAGGGGAAAGCGCGTCCAACGTAG
Upstream 100 bases:
>100_bases AATCCCCGTTGCCCAGAACCTGAATGTCCTTTGCTGCTGCGCGACGTCGAGGCGATAGAGTTAGAACTGGCCCCTAGCGA CAATTGAAGGAATGGCTCTG
Downstream 100 bases:
>100_bases AATCGAAATGACCAAGGACTGCTGTCTTGAGCGCTCAGGCAGACCAGGATCACTTCACAGAGCTCGATAACCTTGCCAGG CTTGCCAAAAAATGTAAAGA
Product: prephenate dehydratase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MELRSASANVSPSPVAFLGPAGTYTELAALLACPEQPHLHSQGSHPLVPYPTISACLEAVAAGQQQWAVVPVENSVEGGV SMTLDALWQLEGLGIRQALILPIRHALIGRASRLEQIEQVYSHPQALAQCQAWLRSHLPQATLIPTRSTTEELDRLQEQP SAAVIASERAATLYQLPVLACPINDHPDNCTRFWVIGRAPLSRSGQQGETSADPASPGGSHTSLAFSLPHNVPGALLKPL QVFAERGLNMSRIESRPTKKSAGTYVFFVDLENPIGQPYLDAEVVAALESIAETLKLFGSYPVHDLCKQGDLSQVAKALP SEGKARPT
Sequences:
>Translated_328_residues MELRSASANVSPSPVAFLGPAGTYTELAALLACPEQPHLHSQGSHPLVPYPTISACLEAVAAGQQQWAVVPVENSVEGGV SMTLDALWQLEGLGIRQALILPIRHALIGRASRLEQIEQVYSHPQALAQCQAWLRSHLPQATLIPTRSTTEELDRLQEQP SAAVIASERAATLYQLPVLACPINDHPDNCTRFWVIGRAPLSRSGQQGETSADPASPGGSHTSLAFSLPHNVPGALLKPL QVFAERGLNMSRIESRPTKKSAGTYVFFVDLENPIGQPYLDAEVVAALESIAETLKLFGSYPVHDLCKQGDLSQVAKALP SEGKARPT >Mature_328_residues MELRSASANVSPSPVAFLGPAGTYTELAALLACPEQPHLHSQGSHPLVPYPTISACLEAVAAGQQQWAVVPVENSVEGGV SMTLDALWQLEGLGIRQALILPIRHALIGRASRLEQIEQVYSHPQALAQCQAWLRSHLPQATLIPTRSTTEELDRLQEQP SAAVIASERAATLYQLPVLACPINDHPDNCTRFWVIGRAPLSRSGQQGETSADPASPGGSHTSLAFSLPHNVPGALLKPL QVFAERGLNMSRIESRPTKKSAGTYVFFVDLENPIGQPYLDAEVVAALESIAETLKLFGSYPVHDLCKQGDLSQVAKALP SEGKARPT
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=294, Percent_Identity=30.952380952381, Blast_Score=107, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6324013, Length=335, Percent_Identity=27.7611940298507, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 35160; Mature: 35160
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00857 PREPHENATE_DEHYDR_1 ; PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELRSASANVSPSPVAFLGPAGTYTELAALLACPEQPHLHSQGSHPLVPYPTISACLEAV CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH AAGQQQWAVVPVENSVEGGVSMTLDALWQLEGLGIRQALILPIRHALIGRASRLEQIEQV HCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH YSHPQALAQCQAWLRSHLPQATLIPTRSTTEELDRLQEQPSAAVIASERAATLYQLPVLA HHCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEE CPINDHPDNCTRFWVIGRAPLSRSGQQGETSADPASPGGSHTSLAFSLPHNVPGALLKPL ECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH QVFAERGLNMSRIESRPTKKSAGTYVFFVDLENPIGQPYLDAEVVAALESIAETLKLFGS HHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC YPVHDLCKQGDLSQVAKALPSEGKARPT CCHHHHHCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MELRSASANVSPSPVAFLGPAGTYTELAALLACPEQPHLHSQGSHPLVPYPTISACLEAV CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH AAGQQQWAVVPVENSVEGGVSMTLDALWQLEGLGIRQALILPIRHALIGRASRLEQIEQV HCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH YSHPQALAQCQAWLRSHLPQATLIPTRSTTEELDRLQEQPSAAVIASERAATLYQLPVLA HHCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHCCCEEE CPINDHPDNCTRFWVIGRAPLSRSGQQGETSADPASPGGSHTSLAFSLPHNVPGALLKPL ECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH QVFAERGLNMSRIESRPTKKSAGTYVFFVDLENPIGQPYLDAEVVAALESIAETLKLFGS HHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC YPVHDLCKQGDLSQVAKALPSEGKARPT CCHHHHHCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]