Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608139

Identifier: 86608139

GI number: 86608139

Start: 665042

End: 666871

Strand: Reverse

Name: 86608139

Synonym: CYB_0651

Alternate gene names: NA

Gene position: 666871-665042 (Counterclockwise)

Preceding gene: 86608141

Following gene: 86608136

Centisome position: 21.89

GC content: 59.56

Gene sequence:

>1830_bases
ATGGTTGCCATCCATCCGGCAAATGATCTGGGTGCTCTGAAAAATCTAGGTTCCACGGCAAGAGGATCCCAGCCTGCTTG
GTGGCCTCCATCTGGGCGGCAACAGGGAACTGTGGCCCCTCTGCAACCTCTGGGGCTGGTTGCTTTGGAAGGTTTGGCCA
CCTGGGGAGATCGCCTGTTGGGCTTGGATCGGGTGAGGGGCTATTTGGTGGAAATTCAAGAGCACAACACCCTGCTGCTC
AATCCCCATCATGTCCATTCTTTCCAAGGCGCTTACGGTTTGTGGGTAGAGTCAGAAGGGGATCAAGCGTGGATTTGGCT
CAGTCGGGAGCAAGAGGGGCAAATCTTGCGCATTCCCATGTCCGCTCTGCAGCAACCGGGATCCCTGGAAGCCTTTCCAG
TGTGTAGGTGCCCCTACCCTATCGAAGGGATCGCCCTCTGGAGCGATCCCCACACGGGAAACCGCTACCTCTATGCCACC
TGCTACCGACGGGGAAAAATCCTGCAACTGGATCCCAGCCGTGGTCTCATCGTGCAGGAGATGCCTGCCCCTGGGGTTGG
CCGAGAACAGATTGCGGTGCAGGGAGACTACCTCTGGGTGAGCGATCGGGTGGAAGAGACGATCTATGTGCTGGAGCGCC
AGACCGGGCGAGAACTGGCCCGTATCCTCACCCCTTCTCCTGGGCCAACAGGCTTGGCCCATTGGCGGGGGCAACTCTGG
GTGGCCTATGCCCACGAAGAAGCCTACATCCACGACAACCCCAACGCTCCAGATCCCTTGTCGGTGGCCCTGCGCGACAA
AACCTGGGTGGCTCCCCTGCGCCTGCGGCCTTTGGATCCCCCTAGCTCCCCCGACCCCTCTGGCGGCAGTGGAACCGAGG
CCGAGGATTCCCCCATTGCCTGTCCGGTAGTTTTTCAGCCCCAGTGTCTGGGGGAACGCGCCACCTACACCCTCTCCCAC
GGCTATCGGGTGGAGCTGACCTATGTGGAAGAAATTGCCCAAGAAGAGCCGCGCTTCCTGCCCGATTTGGTCTGGCGAAT
TGCCTTGCCCTGCAACAGCCTTCGCCAACGGGTGCGCAGCCTGCACTGGGTAGGTCTGCCGTTTGAAGTGGAAGAGCAAT
CTGGCCAACAGGTGGCGGTGTTTTCGCTGGGATCCCTGGGGGCCCATGAGGTGCGCTTGTTTGGCTGGCGGGCGGTGCTG
GATCTCTACAGTATCAAGTACTGCATCGATCCACTGGATGTAGAGGCTGCCGTTTTGCCCAGGGAGCTGCGGGATCGCTA
CTTGGTGGACGATGACTACCTGGCCATGGACACCTCGATTGTCCGAGAGGCAGCGCGGCTGGCCGTTGGCAGCGAGACCA
ACTTGCTGCGCAAAATGCTCAATATCCGGGCCTATGTTTACGACAAGCTCTCCTACCGGGTCACCTCTCGCATCGATCCG
CCGGATGAGGTTTTGCGGCGTGGCTCCGGTTCTTGTGGCGAATATGTGGGGGTGCTGTTGGCTTTGGCCCGCCTCAATGG
AATCCCTTGCCGCACGGTGGGGCGCTACAAATGTCCTCCCCATCCAGAACTGAAAGGGATCCCGCTGTTTCCCCAGTACA
ACCACGTGTGGATTGAGTTTTATCTGCCCGGCTGGGGTTGGGTGCCGATGGAGTCGAACCCCGACGATCGGGGGGAGCGC
CCCTATTCGCAGCGCTACTTCATGGGCTTGCCCTGGACCCATGCCGAGATCGCCAAAGGGATCCCTTTCGAGACGATCAA
CACCGACCAAGCCTCAATTGGGGAGCTGGCCATTAACCATGTGCAGTTTCGCATCTTAGAAGAAATTTGA

Upstream 100 bases:

>100_bases
CGCATCATAATAATGTTGGACAGTAAATATTGGACAGTCGTACCGCCTTGGTGCAGATCGCGCCAGCATGTCAACTTCAT
CCATAGGCAAGGAAGCCTTC

Downstream 100 bases:

>100_bases
AAGGCGAATAGAGTGAGAAAACGGCCCTGAGATTGGCCAACACTGCTCCGGGAGTGATTTTTGCCGAAGATAACAATGTG
GCTCCTGATGTGGTGTGGGT

Product: membrane-bound protease

Products: NA

Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like; Membrane-Bound Protease; Copper Amine Oxidase Domain Protein

Number of amino acids: Translated: 609; Mature: 609

Protein sequence:

>609_residues
MVAIHPANDLGALKNLGSTARGSQPAWWPPSGRQQGTVAPLQPLGLVALEGLATWGDRLLGLDRVRGYLVEIQEHNTLLL
NPHHVHSFQGAYGLWVESEGDQAWIWLSREQEGQILRIPMSALQQPGSLEAFPVCRCPYPIEGIALWSDPHTGNRYLYAT
CYRRGKILQLDPSRGLIVQEMPAPGVGREQIAVQGDYLWVSDRVEETIYVLERQTGRELARILTPSPGPTGLAHWRGQLW
VAYAHEEAYIHDNPNAPDPLSVALRDKTWVAPLRLRPLDPPSSPDPSGGSGTEAEDSPIACPVVFQPQCLGERATYTLSH
GYRVELTYVEEIAQEEPRFLPDLVWRIALPCNSLRQRVRSLHWVGLPFEVEEQSGQQVAVFSLGSLGAHEVRLFGWRAVL
DLYSIKYCIDPLDVEAAVLPRELRDRYLVDDDYLAMDTSIVREAARLAVGSETNLLRKMLNIRAYVYDKLSYRVTSRIDP
PDEVLRRGSGSCGEYVGVLLALARLNGIPCRTVGRYKCPPHPELKGIPLFPQYNHVWIEFYLPGWGWVPMESNPDDRGER
PYSQRYFMGLPWTHAEIAKGIPFETINTDQASIGELAINHVQFRILEEI

Sequences:

>Translated_609_residues
MVAIHPANDLGALKNLGSTARGSQPAWWPPSGRQQGTVAPLQPLGLVALEGLATWGDRLLGLDRVRGYLVEIQEHNTLLL
NPHHVHSFQGAYGLWVESEGDQAWIWLSREQEGQILRIPMSALQQPGSLEAFPVCRCPYPIEGIALWSDPHTGNRYLYAT
CYRRGKILQLDPSRGLIVQEMPAPGVGREQIAVQGDYLWVSDRVEETIYVLERQTGRELARILTPSPGPTGLAHWRGQLW
VAYAHEEAYIHDNPNAPDPLSVALRDKTWVAPLRLRPLDPPSSPDPSGGSGTEAEDSPIACPVVFQPQCLGERATYTLSH
GYRVELTYVEEIAQEEPRFLPDLVWRIALPCNSLRQRVRSLHWVGLPFEVEEQSGQQVAVFSLGSLGAHEVRLFGWRAVL
DLYSIKYCIDPLDVEAAVLPRELRDRYLVDDDYLAMDTSIVREAARLAVGSETNLLRKMLNIRAYVYDKLSYRVTSRIDP
PDEVLRRGSGSCGEYVGVLLALARLNGIPCRTVGRYKCPPHPELKGIPLFPQYNHVWIEFYLPGWGWVPMESNPDDRGER
PYSQRYFMGLPWTHAEIAKGIPFETINTDQASIGELAINHVQFRILEEI
>Mature_609_residues
MVAIHPANDLGALKNLGSTARGSQPAWWPPSGRQQGTVAPLQPLGLVALEGLATWGDRLLGLDRVRGYLVEIQEHNTLLL
NPHHVHSFQGAYGLWVESEGDQAWIWLSREQEGQILRIPMSALQQPGSLEAFPVCRCPYPIEGIALWSDPHTGNRYLYAT
CYRRGKILQLDPSRGLIVQEMPAPGVGREQIAVQGDYLWVSDRVEETIYVLERQTGRELARILTPSPGPTGLAHWRGQLW
VAYAHEEAYIHDNPNAPDPLSVALRDKTWVAPLRLRPLDPPSSPDPSGGSGTEAEDSPIACPVVFQPQCLGERATYTLSH
GYRVELTYVEEIAQEEPRFLPDLVWRIALPCNSLRQRVRSLHWVGLPFEVEEQSGQQVAVFSLGSLGAHEVRLFGWRAVL
DLYSIKYCIDPLDVEAAVLPRELRDRYLVDDDYLAMDTSIVREAARLAVGSETNLLRKMLNIRAYVYDKLSYRVTSRIDP
PDEVLRRGSGSCGEYVGVLLALARLNGIPCRTVGRYKCPPHPELKGIPLFPQYNHVWIEFYLPGWGWVPMESNPDDRGER
PYSQRYFMGLPWTHAEIAKGIPFETINTDQASIGELAINHVQFRILEEI

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68486; Mature: 68486

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIHPANDLGALKNLGSTARGSQPAWWPPSGRQQGTVAPLQPLGLVALEGLATWGDRLL
CEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLDRVRGYLVEIQEHNTLLLNPHHVHSFQGAYGLWVESEGDQAWIWLSREQEGQILRIPM
HHHHHCEEEEEEECCCEEEECCHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECH
SALQQPGSLEAFPVCRCPYPIEGIALWSDPHTGNRYLYATCYRRGKILQLDPSRGLIVQE
HHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEE
MPAPGVGREQIAVQGDYLWVSDRVEETIYVLERQTGRELARILTPSPGPTGLAHWRGQLW
CCCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEE
VAYAHEEAYIHDNPNAPDPLSVALRDKTWVAPLRLRPLDPPSSPDPSGGSGTEAEDSPIA
EEEECCEEEEECCCCCCCCEEEEEECCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEE
CPVVFQPQCLGERATYTLSHGYRVELTYVEEIAQEEPRFLPDLVWRIALPCNSLRQRVRS
EEEEECHHHCCCCCEEEECCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
LHWVGLPFEVEEQSGQQVAVFSLGSLGAHEVRLFGWRAVLDLYSIKYCIDPLDVEAAVLP
HEEECCCEEECCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHCC
RELRDRYLVDDDYLAMDTSIVREAARLAVGSETNLLRKMLNIRAYVYDKLSYRVTSRIDP
HHHHHCEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCEEEEECCCCC
PDEVLRRGSGSCGEYVGVLLALARLNGIPCRTVGRYKCPPHPELKGIPLFPQYNHVWIEF
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YLPGWGWVPMESNPDDRGERPYSQRYFMGLPWTHAEIAKGIPFETINTDQASIGELAINH
EECCCEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH
VQFRILEEI
HHEEEECCC
>Mature Secondary Structure
MVAIHPANDLGALKNLGSTARGSQPAWWPPSGRQQGTVAPLQPLGLVALEGLATWGDRLL
CEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GLDRVRGYLVEIQEHNTLLLNPHHVHSFQGAYGLWVESEGDQAWIWLSREQEGQILRIPM
HHHHHCEEEEEEECCCEEEECCHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEECH
SALQQPGSLEAFPVCRCPYPIEGIALWSDPHTGNRYLYATCYRRGKILQLDPSRGLIVQE
HHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCCEEEEEEEECCCEEEEECCCCCEEEEE
MPAPGVGREQIAVQGDYLWVSDRVEETIYVLERQTGRELARILTPSPGPTGLAHWRGQLW
CCCCCCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEE
VAYAHEEAYIHDNPNAPDPLSVALRDKTWVAPLRLRPLDPPSSPDPSGGSGTEAEDSPIA
EEEECCEEEEECCCCCCCCEEEEEECCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCEE
CPVVFQPQCLGERATYTLSHGYRVELTYVEEIAQEEPRFLPDLVWRIALPCNSLRQRVRS
EEEEECHHHCCCCCEEEECCCEEEEEHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
LHWVGLPFEVEEQSGQQVAVFSLGSLGAHEVRLFGWRAVLDLYSIKYCIDPLDVEAAVLP
HEEECCCEEECCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHCC
RELRDRYLVDDDYLAMDTSIVREAARLAVGSETNLLRKMLNIRAYVYDKLSYRVTSRIDP
HHHHHCEECCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCEEEEECCCCC
PDEVLRRGSGSCGEYVGVLLALARLNGIPCRTVGRYKCPPHPELKGIPLFPQYNHVWIEF
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
YLPGWGWVPMESNPDDRGERPYSQRYFMGLPWTHAEIAKGIPFETINTDQASIGELAINH
EECCCEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHH
VQFRILEEI
HHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA