| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607963
Identifier: 86607963
GI number: 86607963
Start: 476536
End: 478557
Strand: Reverse
Name: 86607963
Synonym: CYB_0469
Alternate gene names: NA
Gene position: 478557-476536 (Counterclockwise)
Preceding gene: 86607964
Following gene: 86607962
Centisome position: 15.71
GC content: 52.08
Gene sequence:
>2022_bases ATGAATCCTCGAGTTCTACTAGTTTGGACGACTCCACCTGATTATGTCCCACCTCTCACTCTTTCAGAGCGTCAAGTAAC TCTATGTCCGAAAGGAAAGGTTAGAAGACAGATATTTGATTTTTTTAGTGTTCCAAAAAGCTTAGTTGAGTGTCCTGACA AAGACTTTGACCTCTATGAATTTGTCCAGTATTCAGATCAAGTCGAAGACAAAGAATTTGACTTGGTGATTGTCTGGACA TCGAGTGTTGATCTGACTAGTCCTTTCAACACGAAAAAATTTGGCTGCCCAACTGTCTTGCTAGCCGGAGATACGCATCA TCACGTGCTCCCTATCACCCACCTTCTAACTTACTGGGCCACTGAAGCCTTTGATTATATTGCCACCGCCTATGACCGAC AGCACCTCCACTGGTTCGCAGCAGCAGGAGTTCAAAGGCTAGCTTGGCTGCCTTTCATTCCCGCTTGTCTCACCAGCTCC AGTTGGATAGAAAAGAAAGAAATTAGAGTTGCGTTTGTGGGTAACCTTAATTTTAACTCTTATCATTACAGACGTCCTAA GTTGATCATGTCCTTGAAAAAACTGGGTCTACCTCTACTTATAAAGACTCGAGTCCACAATCCTCAACTAATATTTGGTA GCTCGTTAATCTCTTTCAACTGCAGCATGAACGGGGATCTGAACTTAAGGAACCTGGAAGTGATTTCTGCAGGGGGCTTT CTGCTTACTGACCAGCTCTCCTTCGCCTCAGGATTGGACGAACTTTTGGCGCCCGGCACCTACTGCGACACCTACAACTC CGAAGCCCAACTCCTGGAGAAAATCCGCTACTACCTAGACCATCCCCAGGAGGCCATTCAAATTGCCCGCCGCGCTTATC ACACTTTCGACCAACACTGGCATCCCCGCCACCGCATTCAGAACCTGCTGGACTGGGTGTTTGGGGGAGAGCTGCCGGAG CCCTTTCGTTACTCGCCCCGCTCTGATGTGCGCTACTTTGTCAGCACGGCCAGCTCTGCCTGGATAGACACACGACTAGG AATCTACGAGCCCATTCAAGAGCTGCATCGCGTGCAGGAGCGACTGAGGGTATTTGTTGGCCGAGGCTGTCCTGGGGTGA TAGCCGCAGACTTGCTGGACCTGCCGCGGCTGGAGCTGTACGTGGAAGAGGGGTTTGGGGATCCCTGTGGTCTGCTGCAG CAGAAGGGAGTGTCCGAGCGGGTGCATGAGGTGAGGGGGGAGCCGAGCAGTTGGCCTAGCTTTGATGCTGTGGTGTGCAC AGCTCAGGACTTGCAGCGGCTGGGGCGGCCTGTGAGGGCTAACTTTGCTTTTGTCTTGGCAGAGGACCACCAACTTCTTT TGGCCAATGCCAGTAAGTTAACGGAAGCAGCAGTGTTGACTGGCTTTGACTTTGGCAAACTCAGGCTTTCGGTAAGGCTC TACCCAGACACCGTTTTTTACGAGAGGACGTATCTTAACTTTCCTGTGTTTCTGTCTAGTCAGGTGCAGACGGTTATCGA CATCGGAGCTGGGGTAGGCCTTGGTAGCGTTTGTTTTCGGGGTTTCTGCCCTGAGGCGGCCATTCATTGTTTTGAGGTGG ATCCCTTGGCCTTGCACCTGCTGCAGCAGAATGCTCTTGGCCTGGGCAACTGCTTTGTGCATCCAGTGGGGCTAGCGGGG CAGGATAGTTGCAGAACTTGTCGGCTCTGGCCGGAGGATCCTCAGGCCGAGTGGGGAGTGGAGCAGGTGCTCCCTTTCCG GGAAGCTAGGGCAGCCCTCAAGGAGTTGGGTTTGGAGCCCATCGATGTGCTCAGGGTGGCTACAGGTGGAGAGGAGGTGG AGGTGTTGACCAGCCTGCAAGAGCAGCTCAAAGACATCAAGGTGATTTACGTGGAGTTTACTTCTGAGCAAGACCGCAAG CGGATTGACCAGATGCTGGATCCCTCTCATCTCCTCTGGCAGGGGGAGATTTCTCAAGGTAACTACGGCTGTCTCTGTTA CCTGAGCAGAGCTTACGTTTAG
Upstream 100 bases:
>100_bases CTCAGGGTAACTACGGGTGCTTATGTTATCTGAATAGATGCATATTCTACGAAAGCAGTGGTAATCTTTAGAAGGCAATC TTTAGGAAGCTCTGAGACTG
Downstream 100 bases:
>100_bases GTAAAGTAGCTGAACAAAGTAAAAAAATGAGCCACGGAGCGGAACAAATACGACTCTCTCTCAGATCTAAGCTTCCTCTT TAGGTCTACTTGCATGTTAT
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; Methyltransferase FkbM
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV
Sequences:
>Translated_673_residues MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV >Mature_673_residues MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYEFVQYSDQVEDKEFDLVIVWT SSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWATEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSS SWIEKKEIRVAFVGNLNFNSYHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHWHPRHRIQNLLDWVFGGELPE PFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQERLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQ QKGVSERVHEVRGEPSSWPSFDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHLLQQNALGLGNCFVHPVGLAG QDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEPIDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRK RIDQMLDPSHLLWQGEISQGNYGCLCYLSRAYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76376; Mature: 76376
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE CCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSSSWIEKKEIRVAFVGNLNFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCC YHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF EECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCCE LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHW EEEECHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQQKGVSERVHEVRGEPSSWPS HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCC FDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL CCEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEE YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHL CCCEEEEEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHH LQQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEP HHHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCH IDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKRIDQMLDPSHLLWQGEISQG HHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCC NYGCLCYLSRAYV CCEEEEEEECCCC >Mature Secondary Structure MNPRVLLVWTTPPDYVPPLTLSERQVTLCPKGKVRRQIFDFFSVPKSLVECPDKDFDLYE CCCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCHHH FVQYSDQVEDKEFDLVIVWTSSVDLTSPFNTKKFGCPTVLLAGDTHHHVLPITHLLTYWA HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH TEAFDYIATAYDRQHLHWFAAAGVQRLAWLPFIPACLTSSSWIEKKEIRVAFVGNLNFNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEEEEECCCCCC YHYRRPKLIMSLKKLGLPLLIKTRVHNPQLIFGSSLISFNCSMNGDLNLRNLEVISAGGF EECCCHHHHHHHHHCCCCEEEEEECCCCEEEECCEEEEEEECCCCCCCEEEEEEEECCCE LLTDQLSFASGLDELLAPGTYCDTYNSEAQLLEKIRYYLDHPQEAIQIARRAYHTFDQHW EEEECHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC HPRHRIQNLLDWVFGGELPEPFRYSPRSDVRYFVSTASSAWIDTRLGIYEPIQELHRVQE CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH RLRVFVGRGCPGVIAADLLDLPRLELYVEEGFGDPCGLLQQKGVSERVHEVRGEPSSWPS HHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCC FDAVVCTAQDLQRLGRPVRANFAFVLAEDHQLLLANASKLTEAAVLTGFDFGKLRLSVRL CCEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEE YPDTVFYERTYLNFPVFLSSQVQTVIDIGAGVGLGSVCFRGFCPEAAIHCFEVDPLALHL CCCEEEEEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHCCCHHHHEEEEECCHHHHHH LQQNALGLGNCFVHPVGLAGQDSCRTCRLWPEDPQAEWGVEQVLPFREARAALKELGLEP HHHCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCH IDVLRVATGGEEVEVLTSLQEQLKDIKVIYVEFTSEQDRKRIDQMLDPSHLLWQGEISQG HHHEEEECCCCHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEECCCC NYGCLCYLSRAYV CCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA