Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607956

Identifier: 86607956

GI number: 86607956

Start: 466819

End: 468018

Strand: Direct

Name: 86607956

Synonym: CYB_0462

Alternate gene names: NA

Gene position: 466819-468018 (Clockwise)

Preceding gene: 86607955

Following gene: 86607960

Centisome position: 15.32

GC content: 56.92

Gene sequence:

>1200_bases
GTGTTGTGGAAACTAAGCCGAAAACTAGTTCCACTACTTCAACAGACGGGAAGCCTGGGGATCTTCTCCTCAGAGCAGGA
ATCAAGGCGCCAGGTTCGTTTTCTGCGCCGCTTCCGCTTCACCCGTATTGGGGGGCGGTTTGTCGGGATCGCCCTGTTGG
TAAGTATTGCTGCTTTCAACACCGGCAACAATCCCCTGTACTTGTTGCTGGGGATGCTGCTCAGCCTCATCCTCATCAGC
GGTACCCTCTCTGATATCACCCTCAAAGATCTGGAGGTCAGCCGGCAGTTGCCTAGCCGCATTTTCGCCGGCCAGCCTGT
CTTGGTGGGTCTCACGCTGGTCAATCGCAAACGGCGCCTGCCCAGCTTCTCGTTGCAGGTGAGCGAACGCATTGAGGGGC
TGAGGCGGGAAGATTGGCCTTCCAGCTATGTTTTGCGGGTGGATCCCGGTGCCAAGGTGGACACTTTTTATCAGCAGACT
TTTTCAAGGCGGGGAGCCTGGCAGTTGCAAGGTTTTGAAGTTGCCACCAGCTTCCCATTTGAACTCTTCCGCAAGGCGGT
GGCAATTAGGGATCCCCAAACGGTGATCGTGTTTCCGCGGCTCGCCCCGGTTCAAGGATTGGCGCTGTGGGATCAGCTCA
GCAGCGGCAACCAATTGCGCCCCCAACCCGGTCGAGAGGGAGACTACCTGAGCTTACGGCCCTACCGCCCCCAGGACGAT
GTGCGCTCTGTCCATTGGAAGATCTCGGCCAAACGGGATCAACTAATCGTGCGGGAGTTGGAGCGTCCACGAGCCCAGGC
CATCACCCTCTGTTTTGAAAACCGCTGGCAGCCCCAGAAAGAGAGGCCCGAGATCCATCGAGACAAGTTGGAGCGAGCTG
TAGAGCGCTGTGCCGGGATCCTCTTCTACTTGATGCGAGAAGGTTACCCGGTAGCACTTGTTACGTTACAAGAGCGGACT
CCTTTTGGGTCAGACCTGGCCCATCAAGATCACCTGCTGACCGTGTTGGCACGACTTACTTTTGTCGGGGATCCCCAGCT
CAGCCCTCCACTGGAAAGAGAACCTGATCCCTCTGTCAAGTTTGACCTCACCCCTCAAGATCGCTGTGTGCTGCTGGCCC
ATCCCGACCAGGATGGAAAATCTGCCCCGGCCCATCTCATCCACACGGGATCGCTGTTGCAATTTATCCCAATTGAGTGA

Upstream 100 bases:

>100_bases
GTTATGGTGATTTCAAATTACACTGAAGCAGCTTGTAGATTCCAGACCTCTTTCTCCTTTGGAGAGGGGCCGGGGATGAA
GGAGTGATGAGGGGACTGCG

Downstream 100 bases:

>100_bases
GCTTCAGGCCCATTTTGATAGCAGGATCCATCTGAGATTGTTTGGAAAGCTTGGCTTGCAGATCCTTGCAAAGCTTTAGG
TTGAACTGCTGGAGAAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MLWKLSRKLVPLLQQTGSLGIFSSEQESRRQVRFLRRFRFTRIGGRFVGIALLVSIAAFNTGNNPLYLLLGMLLSLILIS
GTLSDITLKDLEVSRQLPSRIFAGQPVLVGLTLVNRKRRLPSFSLQVSERIEGLRREDWPSSYVLRVDPGAKVDTFYQQT
FSRRGAWQLQGFEVATSFPFELFRKAVAIRDPQTVIVFPRLAPVQGLALWDQLSSGNQLRPQPGREGDYLSLRPYRPQDD
VRSVHWKISAKRDQLIVRELERPRAQAITLCFENRWQPQKERPEIHRDKLERAVERCAGILFYLMREGYPVALVTLQERT
PFGSDLAHQDHLLTVLARLTFVGDPQLSPPLEREPDPSVKFDLTPQDRCVLLAHPDQDGKSAPAHLIHTGSLLQFIPIE

Sequences:

>Translated_399_residues
MLWKLSRKLVPLLQQTGSLGIFSSEQESRRQVRFLRRFRFTRIGGRFVGIALLVSIAAFNTGNNPLYLLLGMLLSLILIS
GTLSDITLKDLEVSRQLPSRIFAGQPVLVGLTLVNRKRRLPSFSLQVSERIEGLRREDWPSSYVLRVDPGAKVDTFYQQT
FSRRGAWQLQGFEVATSFPFELFRKAVAIRDPQTVIVFPRLAPVQGLALWDQLSSGNQLRPQPGREGDYLSLRPYRPQDD
VRSVHWKISAKRDQLIVRELERPRAQAITLCFENRWQPQKERPEIHRDKLERAVERCAGILFYLMREGYPVALVTLQERT
PFGSDLAHQDHLLTVLARLTFVGDPQLSPPLEREPDPSVKFDLTPQDRCVLLAHPDQDGKSAPAHLIHTGSLLQFIPIE
>Mature_399_residues
MLWKLSRKLVPLLQQTGSLGIFSSEQESRRQVRFLRRFRFTRIGGRFVGIALLVSIAAFNTGNNPLYLLLGMLLSLILIS
GTLSDITLKDLEVSRQLPSRIFAGQPVLVGLTLVNRKRRLPSFSLQVSERIEGLRREDWPSSYVLRVDPGAKVDTFYQQT
FSRRGAWQLQGFEVATSFPFELFRKAVAIRDPQTVIVFPRLAPVQGLALWDQLSSGNQLRPQPGREGDYLSLRPYRPQDD
VRSVHWKISAKRDQLIVRELERPRAQAITLCFENRWQPQKERPEIHRDKLERAVERCAGILFYLMREGYPVALVTLQERT
PFGSDLAHQDHLLTVLARLTFVGDPQLSPPLEREPDPSVKFDLTPQDRCVLLAHPDQDGKSAPAHLIHTGSLLQFIPIE

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45583; Mature: 45583

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWKLSRKLVPLLQQTGSLGIFSSEQESRRQVRFLRRFRFTRIGGRFVGIALLVSIAAFN
CCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
TGNNPLYLLLGMLLSLILISGTLSDITLKDLEVSRQLPSRIFAGQPVLVGLTLVNRKRRL
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCC
PSFSLQVSERIEGLRREDWPSSYVLRVDPGAKVDTFYQQTFSRRGAWQLQGFEVATSFPF
CCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECEEEECCCCH
ELFRKAVAIRDPQTVIVFPRLAPVQGLALWDQLSSGNQLRPQPGREGDYLSLRPYRPQDD
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHH
VRSVHWKISAKRDQLIVRELERPRAQAITLCFENRWQPQKERPEIHRDKLERAVERCAGI
HHEEEEEEECCHHHHHHHHHCCCHHHEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LFYLMREGYPVALVTLQERTPFGSDLAHQDHLLTVLARLTFVGDPQLSPPLEREPDPSVK
HHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
FDLTPQDRCVLLAHPDQDGKSAPAHLIHTGSLLQFIPIE
EECCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECCC
>Mature Secondary Structure
MLWKLSRKLVPLLQQTGSLGIFSSEQESRRQVRFLRRFRFTRIGGRFVGIALLVSIAAFN
CCCCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
TGNNPLYLLLGMLLSLILISGTLSDITLKDLEVSRQLPSRIFAGQPVLVGLTLVNRKRRL
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHCC
PSFSLQVSERIEGLRREDWPSSYVLRVDPGAKVDTFYQQTFSRRGAWQLQGFEVATSFPF
CCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEECEEEECCCCH
ELFRKAVAIRDPQTVIVFPRLAPVQGLALWDQLSSGNQLRPQPGREGDYLSLRPYRPQDD
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHH
VRSVHWKISAKRDQLIVRELERPRAQAITLCFENRWQPQKERPEIHRDKLERAVERCAGI
HHEEEEEEECCHHHHHHHHHCCCHHHEEEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
LFYLMREGYPVALVTLQERTPFGSDLAHQDHLLTVLARLTFVGDPQLSPPLEREPDPSVK
HHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE
FDLTPQDRCVLLAHPDQDGKSAPAHLIHTGSLLQFIPIE
EECCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA