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The map label for this gene is degT [H]

Identifier: 86607955

GI number: 86607955

Start: 465556

End: 466713

Strand: Direct

Name: degT [H]

Synonym: CYB_0461

Alternate gene names: 86607955

Gene position: 465556-466713 (Clockwise)

Preceding gene: 86607953

Following gene: 86607956

Centisome position: 15.28

GC content: 64.08

Gene sequence:

>1158_bases
ATGACGGAGGAGCCGATTCCGCTGCTGGATTTGACGGGGCAGTACCGCGCTTTGGCCGGGCTGTTGCAGCCGCAGGTGGA
AGCGCTGCTGGCCTCTGGCCAGTACATCGGCGGGGCGGCGGTGCAGCGCTTTGAGGAGCAGTTTGCCCAGTTTTTGGGGG
GTGGCTCTTTGGAGGCCGTCGGCTGCAATTCCGGCACCGATGCCCTGGTGCTGGCTTTGCAGGCTTTGGGCATCCAGGCG
GGGGATGAGGTGCTCACCAGTGCCTTCAGTTTTTTTGCCTCGGCTGCCGCCATCAGCCGGGTGGGGGCGCGTCCGGTGTT
TGTGGATGTGGATCCGTGCACCTTTAACCTGGATCCGCAGCTGCTGGAAAGGAGCATCTCCTGCCGCACCAAGGCGGTGG
TGGTGGTGCATTTGTTTGGGCAGGCGGCCAACATGACCCAGATTCTGGCTATTGCCCGGCGGCACGGCTTGGCGGTGGTG
GAAGATTGTGCCCAGGCGGTGGGGGCCTGCTGGGGGGGCAGGCCGGTGGGCACTTGGGGGGAGGTGGGCTGCTTCAGCTT
TTTTCCCAGCAAGAATCTGGGTGCGGCTGGGGATGGGGGGGCGGTGGTGACGCGGGATCCCCAACTGGCCAGGCGGGTGC
GGGCTCTCAGGGAGCATGGGCAGACCCGTCCGTACCACCACGAGCATTTGGGTCTCAACAGTCGTTTGGATGCGCTGCAG
GCGGTGATTCTCTCGGTGAAGCTGCCCCATCTGCGGGAGTGGAACTGGCGGCGGCAGGGGATTGCGGAGTGTTACCACCG
CTTGCTGCAAGGGATCCCGGGCTTGATGTTGCCCCAGGTGGGGGTGGGGGGGAACTCGGTGTGGCACCAGTACACGGTGC
GGGTGGTGGGTTCTGAGCCGTTGGATTCGCGGCGGCGGGACGATTTGCAGCAGGGTCTGAAGGAGCGGGGCATTGGCAGT
CGGGTTTACTATCCTCTGCCGTTGCCGCTGCAGCCGGTGTACCGAGGGCTGGGCTACAGGCGGGGGGATCTGCCCAATGC
CGAGCTATGTGCGGCTCAGGTGTTGTCTTTGCCGTGTTTTCCTGAGTTGACCACCTGTCAACAAGAGCGGGTGGCTGCGG
CCATTGCTGAAATCCTCTCAGAAAAAACCTGCCCGTAG

Upstream 100 bases:

>100_bases
GAAGACAAACCCCAGAACCCTTCTGGGCCAGAGCGTTGTGTACACAGGCTCTCATCCGCGATGATGGGCTGTGGCCGCCA
CCTTCTGCAAAGGCAGCACC

Downstream 100 bases:

>100_bases
CACTGGTTATGGTGATTTCAAATTACACTGAAGCAGCTTGTAGATTCCAGACCTCTTTCTCCTTTGGAGAGGGGCCGGGG
ATGAAGGAGTGATGAGGGGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTEEPIPLLDLTGQYRALAGLLQPQVEALLASGQYIGGAAVQRFEEQFAQFLGGGSLEAVGCNSGTDALVLALQALGIQA
GDEVLTSAFSFFASAAAISRVGARPVFVDVDPCTFNLDPQLLERSISCRTKAVVVVHLFGQAANMTQILAIARRHGLAVV
EDCAQAVGACWGGRPVGTWGEVGCFSFFPSKNLGAAGDGGAVVTRDPQLARRVRALREHGQTRPYHHEHLGLNSRLDALQ
AVILSVKLPHLREWNWRRQGIAECYHRLLQGIPGLMLPQVGVGGNSVWHQYTVRVVGSEPLDSRRRDDLQQGLKERGIGS
RVYYPLPLPLQPVYRGLGYRRGDLPNAELCAAQVLSLPCFPELTTCQQERVAAAIAEILSEKTCP

Sequences:

>Translated_385_residues
MTEEPIPLLDLTGQYRALAGLLQPQVEALLASGQYIGGAAVQRFEEQFAQFLGGGSLEAVGCNSGTDALVLALQALGIQA
GDEVLTSAFSFFASAAAISRVGARPVFVDVDPCTFNLDPQLLERSISCRTKAVVVVHLFGQAANMTQILAIARRHGLAVV
EDCAQAVGACWGGRPVGTWGEVGCFSFFPSKNLGAAGDGGAVVTRDPQLARRVRALREHGQTRPYHHEHLGLNSRLDALQ
AVILSVKLPHLREWNWRRQGIAECYHRLLQGIPGLMLPQVGVGGNSVWHQYTVRVVGSEPLDSRRRDDLQQGLKERGIGS
RVYYPLPLPLQPVYRGLGYRRGDLPNAELCAAQVLSLPCFPELTTCQQERVAAAIAEILSEKTCP
>Mature_384_residues
TEEPIPLLDLTGQYRALAGLLQPQVEALLASGQYIGGAAVQRFEEQFAQFLGGGSLEAVGCNSGTDALVLALQALGIQAG
DEVLTSAFSFFASAAAISRVGARPVFVDVDPCTFNLDPQLLERSISCRTKAVVVVHLFGQAANMTQILAIARRHGLAVVE
DCAQAVGACWGGRPVGTWGEVGCFSFFPSKNLGAAGDGGAVVTRDPQLARRVRALREHGQTRPYHHEHLGLNSRLDALQA
VILSVKLPHLREWNWRRQGIAECYHRLLQGIPGLMLPQVGVGGNSVWHQYTVRVVGSEPLDSRRRDDLQQGLKERGIGSR
VYYPLPLPLQPVYRGLGYRRGDLPNAELCAAQVLSLPCFPELTTCQQERVAAAIAEILSEKTCP

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=369, Percent_Identity=35.230352303523, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI2367285, Length=368, Percent_Identity=31.5217391304348, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41635; Mature: 41504

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEPIPLLDLTGQYRALAGLLQPQVEALLASGQYIGGAAVQRFEEQFAQFLGGGSLEAV
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GCNSGTDALVLALQALGIQAGDEVLTSAFSFFASAAAISRVGARPVFVDVDPCTFNLDPQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCHH
LLERSISCRTKAVVVVHLFGQAANMTQILAIARRHGLAVVEDCAQAVGACWGGRPVGTWG
HHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
EVGCFSFFPSKNLGAAGDGGAVVTRDPQLARRVRALREHGQTRPYHHEHLGLNSRLDALQ
CCCHHEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH
AVILSVKLPHLREWNWRRQGIAECYHRLLQGIPGLMLPQVGVGGNSVWHQYTVRVVGSEP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEEEEEECCCC
LDSRRRDDLQQGLKERGIGSRVYYPLPLPLQPVYRGLGYRRGDLPNAELCAAQVLSLPCF
CCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
PELTTCQQERVAAAIAEILSEKTCP
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TEEPIPLLDLTGQYRALAGLLQPQVEALLASGQYIGGAAVQRFEEQFAQFLGGGSLEAV
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
GCNSGTDALVLALQALGIQAGDEVLTSAFSFFASAAAISRVGARPVFVDVDPCTFNLDPQ
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCHH
LLERSISCRTKAVVVVHLFGQAANMTQILAIARRHGLAVVEDCAQAVGACWGGRPVGTWG
HHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
EVGCFSFFPSKNLGAAGDGGAVVTRDPQLARRVRALREHGQTRPYHHEHLGLNSRLDALQ
CCCHHEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHH
AVILSVKLPHLREWNWRRQGIAECYHRLLQGIPGLMLPQVGVGGNSVWHQYTVRVVGSEP
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEEEEEEEECCCC
LDSRRRDDLQQGLKERGIGSRVYYPLPLPLQPVYRGLGYRRGDLPNAELCAAQVLSLPCF
CCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
PELTTCQQERVAAAIAEILSEKTCP
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]