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The map label for this gene is yebA [H]

Identifier: 86607953

GI number: 86607953

Start: 463030

End: 463950

Strand: Direct

Name: yebA [H]

Synonym: CYB_0458

Alternate gene names: 86607953

Gene position: 463030-463950 (Clockwise)

Preceding gene: 86607952

Following gene: 86607955

Centisome position: 15.2

GC content: 62.32

Gene sequence:

>921_bases
GTGTTGAACTCGGTGATGAAGCTTTTGGTTATGGCAGCGCGCCTTTTCTCCCCCCGAGCTCGGCGGCTGCGCTTTTGGCT
GAAGCTGGGGCTGGCTCTGCTCTGGTTTTATCCCACTGCTCTGCTGGCCCAAACCCAACCAACCCCTTTGCCCCCGCCGC
CTGTGGTGGAACCGGCCCTAGACACGCCTGGGGCGGCAGCCCTGCTGCTGGATGGAGCCATTCCTTTACGAGAGGGCAGC
CCTGCGACCCTTGAGGCAGAAACCCGCACAGAGACGGTCATGGGCCGTGAGATTGTGATTGAGCCCCAGAAGAACCATGA
CCGGGTTCCCCATGCTCAGCCTGAAAGTGGGGTGCCGGTGGTGCTGATGGAACGCAGCTCCGGTCGCCGCATCATCCTCG
CCCCTGGCCAAGAGATTCGCATTGAGGATCCCAGCCAGCCCCAAGCTCCTGAACCGGGAACGCCGACGTTGCCTGAACTG
GCCGTAGGTGAAGAACGACTGCTCTATCCCTTACCTCACCCGGTGCCGATCACTTCTGGATTTGGCATGCGAATTCACCC
CATCCGCGGAGAGCCAGAGTTTCATGCCGGGGTGGATTTGGGGGCCAGCATGGGCACGCCGATCCTGGCCTCTTTAAGCG
GCAAGGTGGTCACTTCGGGATCCCTGGGGGGTCTAGGGATCACCGTTGTGCTGGAGCATGCCGGCGGTCGGCGCACTCGC
TATGGCCACATGTCCGAAGTTGCTGTAACACCGGGGGAAGTGGTAGAGCGGGGATCCGTCATCGGCTACGTGGGGGCGAC
CGGAGCGGTAACTGGGCCGCACCTCCACTTTGAGCTGTGGAAGCGGGCGGTGGGGCAAGGTTGGGTGGTTCTGGACGCCA
CAGATGATCTGAAGGTTGCTGTTGCCCAGCTGCCGGGTTAG

Upstream 100 bases:

>100_bases
AGCCATCCATTCTGACGCTTACACCCGACCAAGTTCGCTTGAGCTATCACATGCCGGCGGGCGATAGCCTGTAATTTCTC
TTGTGTTTTTTATGTGGCCT

Downstream 100 bases:

>100_bases
CCAGAGCCGGCTTGGGTTAGCATAGGTGGGCGGGCTCCAACTGGAATGCTGGCGCAGGTAACCAGTTGGGTCATGCAGGT
TTTGCGGACGTGGCGGAACG

Product: M23B family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNSVMKLLVMAARLFSPRARRLRFWLKLGLALLWFYPTALLAQTQPTPLPPPPVVEPALDTPGAAALLLDGAIPLREGS
PATLEAETRTETVMGREIVIEPQKNHDRVPHAQPESGVPVVLMERSSGRRIILAPGQEIRIEDPSQPQAPEPGTPTLPEL
AVGEERLLYPLPHPVPITSGFGMRIHPIRGEPEFHAGVDLGASMGTPILASLSGKVVTSGSLGGLGITVVLEHAGGRRTR
YGHMSEVAVTPGEVVERGSVIGYVGATGAVTGPHLHFELWKRAVGQGWVVLDATDDLKVAVAQLPG

Sequences:

>Translated_306_residues
MLNSVMKLLVMAARLFSPRARRLRFWLKLGLALLWFYPTALLAQTQPTPLPPPPVVEPALDTPGAAALLLDGAIPLREGS
PATLEAETRTETVMGREIVIEPQKNHDRVPHAQPESGVPVVLMERSSGRRIILAPGQEIRIEDPSQPQAPEPGTPTLPEL
AVGEERLLYPLPHPVPITSGFGMRIHPIRGEPEFHAGVDLGASMGTPILASLSGKVVTSGSLGGLGITVVLEHAGGRRTR
YGHMSEVAVTPGEVVERGSVIGYVGATGAVTGPHLHFELWKRAVGQGWVVLDATDDLKVAVAQLPG
>Mature_306_residues
MLNSVMKLLVMAARLFSPRARRLRFWLKLGLALLWFYPTALLAQTQPTPLPPPPVVEPALDTPGAAALLLDGAIPLREGS
PATLEAETRTETVMGREIVIEPQKNHDRVPHAQPESGVPVVLMERSSGRRIILAPGQEIRIEDPSQPQAPEPGTPTLPEL
AVGEERLLYPLPHPVPITSGFGMRIHPIRGEPEFHAGVDLGASMGTPILASLSGKVVTSGSLGGLGITVVLEHAGGRRTR
YGHMSEVAVTPGEVVERGSVIGYVGATGAVTGPHLHFELWKRAVGQGWVVLDATDDLKVAVAQLPG

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=39.1304347826087, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32612; Mature: 32612

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNSVMKLLVMAARLFSPRARRLRFWLKLGLALLWFYPTALLAQTQPTPLPPPPVVEPAL
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DTPGAAALLLDGAIPLREGSPATLEAETRTETVMGREIVIEPQKNHDRVPHAQPESGVPV
CCCCCEEEEEECCEECCCCCCCEEEECCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCE
VLMERSSGRRIILAPGQEIRIEDPSQPQAPEPGTPTLPELAVGEERLLYPLPHPVPITSG
EEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCC
FGMRIHPIRGEPEFHAGVDLGASMGTPILASLSGKVVTSGSLGGLGITVVLEHAGGRRTR
CCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEEECCCCCCCC
YGHMSEVAVTPGEVVERGSVIGYVGATGAVTGPHLHFELWKRAVGQGWVVLDATDDLKVA
CCCCCEEEECCHHHHHCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCEEE
VAQLPG
EEECCC
>Mature Secondary Structure
MLNSVMKLLVMAARLFSPRARRLRFWLKLGLALLWFYPTALLAQTQPTPLPPPPVVEPAL
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DTPGAAALLLDGAIPLREGSPATLEAETRTETVMGREIVIEPQKNHDRVPHAQPESGVPV
CCCCCEEEEEECCEECCCCCCCEEEECCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCE
VLMERSSGRRIILAPGQEIRIEDPSQPQAPEPGTPTLPELAVGEERLLYPLPHPVPITSG
EEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCHHCCCCEEEECCCCCCCCCCC
FGMRIHPIRGEPEFHAGVDLGASMGTPILASLSGKVVTSGSLGGLGITVVLEHAGGRRTR
CCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCEEEEEEEECCCCCCCC
YGHMSEVAVTPGEVVERGSVIGYVGATGAVTGPHLHFELWKRAVGQGWVVLDATDDLKVA
CCCCCEEEECCHHHHHCCCEEEEECCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCEEE
VAQLPG
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]