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The map label for this gene is rfaQ [H]

Identifier: 86607954

GI number: 86607954

Start: 464348

End: 465361

Strand: Reverse

Name: rfaQ [H]

Synonym: CYB_0460

Alternate gene names: 86607954

Gene position: 465361-464348 (Counterclockwise)

Preceding gene: 86607957

Following gene: 86607949

Centisome position: 15.27

GC content: 64.2

Gene sequence:

>1014_bases
ATGCAGGTGGCTTCTCGAGCAGTTGGCGGCACAGCGCCTTTGGCCCCCCGCCTTTTGGCTTTGGTGCCGGGCGGGATTGG
TGACCAGATTTTGTTTTTTCCCACCTTGGCCAGTTTGCGGCAGCGCTTTCCTGAGGCGGAGCTGGAGGTGGTTGTGGAGC
CGCGGGCGGCGGCTGCCTACGAGGTTTGTCCTTCGGTGAGTCGGGTGCTGACTTTTCCGTTCAAAGAACAGCTGTCGTTG
GGGGATCTCAGCGACCTGCTGGGGCGCATTCGGGAGCGGCAGTATGACGGGGTGCTGAGCCTGGGCCGAAGCTTGGGGGT
CAAGCTGTTGTTGTGGCTGACCGGCATTCCCAAGCGGGTGGGCTATGCGCCGCCGGGGCCGGGGCGACCTTGGCTGACCG
ACCCGGTGCCCCTGAAGCCGGCCCAGTATGCGGCCCAGATGTACCACGACCTGGTGCAGGGGTTTGGCATTGCTGCGCCG
GCGGGGTTGCCCCAGATTCGTCTGAAAAAAGCAGACCTGGAGTGGGCAGAGCAGGAACGCAAGCGCCTTTTGGGGGATGC
CGCTCAAGATTATGTGCTGTTGCATCCGGGGGCCAGCCAGCTGTCGCAGGAGAAGGGAATTCAGAAGATCTATCCCTCTG
CCAACTGGGTCAAGGTCATCAAGGGTTTTCGGGAGCAGCGGCCGGAGCTGCCGTTGGTGCTGGTGGTGGGGCCAGAGGAT
GAGCAGCTGGCGGAGGGCTTTCTGGCGCAACTGCCGGAGCTGCCGGTGAGCCGTCCTGTCCGGCTGGGGCAGCTGGCGGC
CTTGATTGGTGGGGCAACGCTGCTGTTGTGCGCCGATAGCGCTCCCATGCATTTGGCGGTGGCGGTGCAGACGCCGCTGG
TGGCGTTGTTTGGGCCCACCGACCCGCTGCGGTTGCTGCCTTCAGAGGGGCCGTTTCGGGCGGTCAAGGGGGCCGATGGG
AAGGTGGAGTCGATTGCCCCCGAGCAAATTCTGCAGGTGATCTTTCCGGCCTAG

Upstream 100 bases:

>100_bases
GTCTTCCGCGGGTCGAGCTGGCCCTGAATCTATCCACCCAATCTGAGATAGAGTAAGCGGGGATCCCCTAGGCTGGATAC
AGCTTTCTACAGGATGCTTT

Downstream 100 bases:

>100_bases
AGCCAAGGTTTTCGTGGCAGCAACCCAGTCCAGTTTCTCTGCAGGCGGACCGAGAAGCCTTCTAGCCTGGGAGATGTGTC
CCTGTCTGCTTTTAGCCGGC

Product: heptosyltransferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MQVASRAVGGTAPLAPRLLALVPGGIGDQILFFPTLASLRQRFPEAELEVVVEPRAAAAYEVCPSVSRVLTFPFKEQLSL
GDLSDLLGRIRERQYDGVLSLGRSLGVKLLLWLTGIPKRVGYAPPGPGRPWLTDPVPLKPAQYAAQMYHDLVQGFGIAAP
AGLPQIRLKKADLEWAEQERKRLLGDAAQDYVLLHPGASQLSQEKGIQKIYPSANWVKVIKGFREQRPELPLVLVVGPED
EQLAEGFLAQLPELPVSRPVRLGQLAALIGGATLLLCADSAPMHLAVAVQTPLVALFGPTDPLRLLPSEGPFRAVKGADG
KVESIAPEQILQVIFPA

Sequences:

>Translated_337_residues
MQVASRAVGGTAPLAPRLLALVPGGIGDQILFFPTLASLRQRFPEAELEVVVEPRAAAAYEVCPSVSRVLTFPFKEQLSL
GDLSDLLGRIRERQYDGVLSLGRSLGVKLLLWLTGIPKRVGYAPPGPGRPWLTDPVPLKPAQYAAQMYHDLVQGFGIAAP
AGLPQIRLKKADLEWAEQERKRLLGDAAQDYVLLHPGASQLSQEKGIQKIYPSANWVKVIKGFREQRPELPLVLVVGPED
EQLAEGFLAQLPELPVSRPVRLGQLAALIGGATLLLCADSAPMHLAVAVQTPLVALFGPTDPLRLLPSEGPFRAVKGADG
KVESIAPEQILQVIFPA
>Mature_337_residues
MQVASRAVGGTAPLAPRLLALVPGGIGDQILFFPTLASLRQRFPEAELEVVVEPRAAAAYEVCPSVSRVLTFPFKEQLSL
GDLSDLLGRIRERQYDGVLSLGRSLGVKLLLWLTGIPKRVGYAPPGPGRPWLTDPVPLKPAQYAAQMYHDLVQGFGIAAP
AGLPQIRLKKADLEWAEQERKRLLGDAAQDYVLLHPGASQLSQEKGIQKIYPSANWVKVIKGFREQRPELPLVLVVGPED
EQLAEGFLAQLPELPVSRPVRLGQLAALIGGATLLLCADSAPMHLAVAVQTPLVALFGPTDPLRLLPSEGPFRAVKGADG
KVESIAPEQILQVIFPA

Specific function: Catalyzes heptose transfer to the lipopolysaccharide core. It transfers a heptose, called heptose(III), to the heptose(II) of the inner core [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=299, Percent_Identity=23.7458193979933, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790050, Length=348, Percent_Identity=23.2758620689655, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011916 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36326; Mature: 36326

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVASRAVGGTAPLAPRLLALVPGGIGDQILFFPTLASLRQRFPEAELEVVVEPRAAAAY
CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
EVCPSVSRVLTFPFKEQLSLGDLSDLLGRIRERQYDGVLSLGRSLGVKLLLWLTGIPKRV
HHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
GYAPPGPGRPWLTDPVPLKPAQYAAQMYHDLVQGFGIAAPAGLPQIRLKKADLEWAEQER
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHH
KRLLGDAAQDYVLLHPGASQLSQEKGIQKIYPSANWVKVIKGFREQRPELPLVLVVGPED
HHHHHHCCCCEEEECCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
EQLAEGFLAQLPELPVSRPVRLGQLAALIGGATLLLCADSAPMHLAVAVQTPLVALFGPT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCC
DPLRLLPSEGPFRAVKGADGKVESIAPEQILQVIFPA
CCCEECCCCCCCCEECCCCCCCHHCCHHHHHHHHCCC
>Mature Secondary Structure
MQVASRAVGGTAPLAPRLLALVPGGIGDQILFFPTLASLRQRFPEAELEVVVEPRAAAAY
CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHH
EVCPSVSRVLTFPFKEQLSLGDLSDLLGRIRERQYDGVLSLGRSLGVKLLLWLTGIPKRV
HHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHC
GYAPPGPGRPWLTDPVPLKPAQYAAQMYHDLVQGFGIAAPAGLPQIRLKKADLEWAEQER
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHH
KRLLGDAAQDYVLLHPGASQLSQEKGIQKIYPSANWVKVIKGFREQRPELPLVLVVGPED
HHHHHHCCCCEEEECCCHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCH
EQLAEGFLAQLPELPVSRPVRLGQLAALIGGATLLLCADSAPMHLAVAVQTPLVALFGPT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCEEEEECCC
DPLRLLPSEGPFRAVKGADGKVESIAPEQILQVIFPA
CCCEECCCCCCCCEECCCCCCCHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA