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The map label for this gene is 86607949

Identifier: 86607949

GI number: 86607949

Start: 459576

End: 460622

Strand: Reverse

Name: 86607949

Synonym: CYB_0454

Alternate gene names: NA

Gene position: 460622-459576 (Counterclockwise)

Preceding gene: 86607954

Following gene: 86607947

Centisome position: 15.12

GC content: 58.45

Gene sequence:

>1047_bases
ATGACTGATCCAGATGCCTCTCTGGCGGTGGGACAACACTCCATTGTTGACCGGGCGCGAGTGCCGGCTCTAATTGCCCA
GTACTTGCCGGTGGAGATCTGCATTTACTACCAAGTCGTCCCCTTGGCCCTGGATACCGACAGCCTCATCTTGGGCATGG
TGGATCCCCAGGATTTGGCGGCGCTGGACTATGTGAGCAAAATGCTGACCTATTCCCAGATTTCCGTCCAGCCAATCCCT
CTCACCGCTCAGCAGCAGCAGGATTTAATTGCCTACTACTTCAGCCATCCCCCCGACCCGGCAGAGGTGGAGCGGCTGCG
CCTCCAGGCCCAAGCCAACCGGGTGACTCGGGAGGTTCCTGCTCCCGTGTCGGGGCCACCCACGCAGTTGAGGCCAACCC
AGCCTCCGTCCGTCCCCGCCGACGAATCAGAAGAGACAGTGCAGCAGTTGCTCAACTCGATGCTGCGGCGGGCTTTGGAT
GAGAAAGCCGAGCAAATTTTCGTGGAGCCTCAAGAGGGGCCTTCTTGTCGAGTGCGCTACCGCCAGCAGGGGATTTTGCG
GGATCTGTTCAAAGATCTCTCCGAGTCCATACGAGCGAAGTTGATCACCGCCATGAAGCGGATGATGGCGCTGGATCCGG
AGTTGATCGGGGAGCCGCAGCAGGCAGAGGTGGAGCGGATGTACCGGGGGGAGCCACTGGTGTTGCAGTTGCGCATCATA
CCGCAGCGCTCCAAAAGTGGCCAGACTGCCGCCTCTAGAGAAGGGGCCATCTTGAGCATCCTGCGAGGGGAAGCTCTCCA
GAAATATCAACAAGGCCAGAATAACCTCCGCGTCTCTGAGACCCTAGCTTTGGCCCAACAGACCTATCAACTGCTGCAAC
AATTGCAAAGTGCTCTCAGCAACACAGTTGACAAGCTTAAGCAGTACCCCAGTCCGCCGCGGAGCGACTGGCCCCTGATG
ACGGAGGTGTTGGCAGCTATTCAAGCCCAAGCCCAGATGATCGCCATCCACCAGCAGGACTGGGAAAAACTCAATTCCGG
CAGTTGA

Upstream 100 bases:

>100_bases
TGAGCCAGGATGCCATGGGCCTCAGGCCGCGAGGGTGTAGGCTTTACTCTATGATCAGGTAGCGACGTCTCGCCTGTGCG
GGATCCACTCCGGGCTTGCC

Downstream 100 bases:

>100_bases
CCCCCCAAAACCAGCCCCGAGCAACATCCCTTCAACGGGATCCCTCCCGCAGCAGCACCAAAATCACTCCGGCAATGATG
CTGATGGTGGCACCGGCAAT

Product: general secretory pathway protein

Products: NA

Alternate protein names: General Secretion Pathway Protein E; GSPII_E N-Terminal Domain Family; General Secretory Pathway Protein; Pilus Assembly Protein; Pilus Biogenesis Protein; Type II/IV Secretion System Protein; ATPase; Type IV Pilus Assembly Protein PilB; General Secretory System II Protein E Domain Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTDPDASLAVGQHSIVDRARVPALIAQYLPVEICIYYQVVPLALDTDSLILGMVDPQDLAALDYVSKMLTYSQISVQPIP
LTAQQQQDLIAYYFSHPPDPAEVERLRLQAQANRVTREVPAPVSGPPTQLRPTQPPSVPADESEETVQQLLNSMLRRALD
EKAEQIFVEPQEGPSCRVRYRQQGILRDLFKDLSESIRAKLITAMKRMMALDPELIGEPQQAEVERMYRGEPLVLQLRII
PQRSKSGQTAASREGAILSILRGEALQKYQQGQNNLRVSETLALAQQTYQLLQQLQSALSNTVDKLKQYPSPPRSDWPLM
TEVLAAIQAQAQMIAIHQQDWEKLNSGS

Sequences:

>Translated_348_residues
MTDPDASLAVGQHSIVDRARVPALIAQYLPVEICIYYQVVPLALDTDSLILGMVDPQDLAALDYVSKMLTYSQISVQPIP
LTAQQQQDLIAYYFSHPPDPAEVERLRLQAQANRVTREVPAPVSGPPTQLRPTQPPSVPADESEETVQQLLNSMLRRALD
EKAEQIFVEPQEGPSCRVRYRQQGILRDLFKDLSESIRAKLITAMKRMMALDPELIGEPQQAEVERMYRGEPLVLQLRII
PQRSKSGQTAASREGAILSILRGEALQKYQQGQNNLRVSETLALAQQTYQLLQQLQSALSNTVDKLKQYPSPPRSDWPLM
TEVLAAIQAQAQMIAIHQQDWEKLNSGS
>Mature_347_residues
TDPDASLAVGQHSIVDRARVPALIAQYLPVEICIYYQVVPLALDTDSLILGMVDPQDLAALDYVSKMLTYSQISVQPIPL
TAQQQQDLIAYYFSHPPDPAEVERLRLQAQANRVTREVPAPVSGPPTQLRPTQPPSVPADESEETVQQLLNSMLRRALDE
KAEQIFVEPQEGPSCRVRYRQQGILRDLFKDLSESIRAKLITAMKRMMALDPELIGEPQQAEVERMYRGEPLVLQLRIIP
QRSKSGQTAASREGAILSILRGEALQKYQQGQNNLRVSETLALAQQTYQLLQQLQSALSNTVDKLKQYPSPPRSDWPLMT
EVLAAIQAQAQMIAIHQQDWEKLNSGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38983; Mature: 38852

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00116 DNA_POLYMERASE_B

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPDASLAVGQHSIVDRARVPALIAQYLPVEICIYYQVVPLALDTDSLILGMVDPQDLA
CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCHHHHHEEEHHHEEECCCCEEEECCCHHHHH
ALDYVSKMLTYSQISVQPIPLTAQQQQDLIAYYFSHPPDPAEVERLRLQAQANRVTREVP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
APVSGPPTQLRPTQPPSVPADESEETVQQLLNSMLRRALDEKAEQIFVEPQEGPSCRVRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
RQQGILRDLFKDLSESIRAKLITAMKRMMALDPELIGEPQQAEVERMYRGEPLVLQLRII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEEEEE
PQRSKSGQTAASREGAILSILRGEALQKYQQGQNNLRVSETLALAQQTYQLLQQLQSALS
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NTVDKLKQYPSPPRSDWPLMTEVLAAIQAQAQMIAIHQQDWEKLNSGS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDPDASLAVGQHSIVDRARVPALIAQYLPVEICIYYQVVPLALDTDSLILGMVDPQDLA
CCCCCCHHCCHHHHHHHHHHHHHHHHHCCHHHHHEEEHHHEEECCCCEEEECCCHHHHH
ALDYVSKMLTYSQISVQPIPLTAQQQQDLIAYYFSHPPDPAEVERLRLQAQANRVTREVP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
APVSGPPTQLRPTQPPSVPADESEETVQQLLNSMLRRALDEKAEQIFVEPQEGPSCRVRY
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
RQQGILRDLFKDLSESIRAKLITAMKRMMALDPELIGEPQQAEVERMYRGEPLVLQLRII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEEEEE
PQRSKSGQTAASREGAILSILRGEALQKYQQGQNNLRVSETLALAQQTYQLLQQLQSALS
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NTVDKLKQYPSPPRSDWPLMTEVLAAIQAQAQMIAIHQQDWEKLNSGS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA