Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yhjX [H]

Identifier: 86607925

GI number: 86607925

Start: 436073

End: 437302

Strand: Direct

Name: yhjX [H]

Synonym: CYB_0428

Alternate gene names: 86607925

Gene position: 436073-437302 (Clockwise)

Preceding gene: 86607924

Following gene: 86607927

Centisome position: 14.31

GC content: 58.78

Gene sequence:

>1230_bases
ATGGGGAGATGGCTTTTCATCCTCCAGGGGCTCCTGGTTCTTCTTTGCTTGGGAACCGTCTATTCCTGGAGCATTTTCCG
CAAGCCCCTGGAAACAGAGCTGGGGATTGGGGCCAGTGAGAGCCTGCTGCCCTACACGGTTGCCCTCGTGTTCTACGCTA
CCCTCATGCCCATCACAGGGTTTGTCATCCCCCGCTGGGGATCCCGCCGAGTACTGGCTCTGGGGGGCAGCTTGGTGGGT
TTGGGCTATGGGCTGGCTAGCTTTGCCCCTTCTATTGGGTGGATCACCCTCTGCTATGGGGTGATTGCCGGTAGCGGAGT
AGGGGTTGCCTATGGGGTGCCGATGGCCGTGGCAGCCCGTTGGTTTCCCGATTGCAAGGGATTGGCCGTGGGATCCACCA
TTGTCGGCTTTGGCCTATCCCCCCTGCTCACTGCTCCCCTGGCCAACTGCTTGATCGAGGCACTGGGGGCTCGGCCTACG
CTGCTGATTTTGGGGATCCTCTTTGCAGCGGTGATCTTGGGGATCGCAACCCAACTGAGATTTCCTCCCCCCGATTGGAT
CCCTTCCTCACCTTTTCCAAGAAAATCCACGAATGGCCCAGATCGCTCTCCGTTGACTTCTCGGCGCTCTCTCCCTCTGC
TGAGAAACCCCTCCTTCTATGGCCTGTGGATCTGCTACGCCATCGGCACTCTGATCGGTTTAAGCGCCATTGGGATTTCT
GGTCCTGTGGGGGAAGAGCTGATCGGCCTGGATCCCCCTGCGGCTGCCAACAGCGTGGCTCTCTTCGCCATTTTCAACGG
GCTCAGCCGTCCTCTGTTTGGCTGGTTGGCCGATCGATTACATCCCCATCAGGTCACTACGGGCTCCTATGGGCTGATCC
TGCTGGCCTGTGGGCTAATGCTCCTGCCTCCTCAGGGATCCCTTCTGGCCTACTGGGTAACTTTTTCCTTGCTTTGGTTT
TGCCTGGGGGGGTGGCTGGCCATGGCTCCCGCCCTGACCCTGCGCTTGTTTGATCCCGAACGCTACGCCCAGAACTACGG
CATTGTGTTTACCGCCTATGGAGTTGGGGCCTTGGTGGGAACGATGATCGCGGGGCAAATTCGCGATAGGCTGGGCAGCT
ATAGCTATACCTTTTATGGGATGGCCGCCTTGGCGGTGGTGGGGATCTGGGTGGCCAACGCTTTTTTGAAGGAGAAGCGG
AAGTTAACGCGGCAGGGATCCCATAAGTAG

Upstream 100 bases:

>100_bases
GAAAGGGCTGAGAGAATGGGTTGAACTCAGCTCCAACAAGCTCTAGATACCCATGAAAAGGGTTGGATTCCCCGTTACTT
TGTATGGACAACCGGCCCAT

Downstream 100 bases:

>100_bases
AGGCAGCAATCTGGCGCTAGGCACTGCTAGCGCGAGCGGCGATTTCATACTCCCCACTGCAAGGCTGAGTGAACCAACTT
AAAGACTTGCCCCCCCACGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVG
LGYGLASFAPSIGWITLCYGVIAGSGVGVAYGVPMAVAARWFPDCKGLAVGSTIVGFGLSPLLTAPLANCLIEALGARPT
LLILGILFAAVILGIATQLRFPPPDWIPSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
GPVGEELIGLDPPAAANSVALFAIFNGLSRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLAYWVTFSLLWF
CLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANAFLKEKR
KLTRQGSHK

Sequences:

>Translated_409_residues
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVG
LGYGLASFAPSIGWITLCYGVIAGSGVGVAYGVPMAVAARWFPDCKGLAVGSTIVGFGLSPLLTAPLANCLIEALGARPT
LLILGILFAAVILGIATQLRFPPPDWIPSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
GPVGEELIGLDPPAAANSVALFAIFNGLSRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLAYWVTFSLLWF
CLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANAFLKEKR
KLTRQGSHK
>Mature_408_residues
GRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVGL
GYGLASFAPSIGWITLCYGVIAGSGVGVAYGVPMAVAARWFPDCKGLAVGSTIVGFGLSPLLTAPLANCLIEALGARPTL
LILGILFAAVILGIATQLRFPPPDWIPSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGISG
PVGEELIGLDPPAAANSVALFAIFNGLSRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLAYWVTFSLLWFC
LGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANAFLKEKRK
LTRQGSHK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI34916028, Length=162, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1789969, Length=403, Percent_Identity=25.8064516129032, Blast_Score=140, Evalue=1e-34,
Organism=Drosophila melanogaster, GI281360217, Length=188, Percent_Identity=29.2553191489362, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28573971, Length=188, Percent_Identity=29.2553191489362, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43717; Mature: 43586

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
FVIPRWGSRRVLALGGSLVGLGYGLASFAPSIGWITLCYGVIAGSGVGVAYGVPMAVAAR
EEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
WFPDCKGLAVGSTIVGFGLSPLLTAPLANCLIEALGARPTLLILGILFAAVILGIATQLR
HCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FPPPDWIPSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GPVGEELIGLDPPAAANSVALFAIFNGLSRPLFGWLADRLHPHQVTTGSYGLILLACGLM
CCCCCHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
LLPPQGSLLAYWVTFSLLWFCLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCEEEEHHHHHHHHH
TMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANAFLKEKRKLTRQGSHK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
FVIPRWGSRRVLALGGSLVGLGYGLASFAPSIGWITLCYGVIAGSGVGVAYGVPMAVAAR
EEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
WFPDCKGLAVGSTIVGFGLSPLLTAPLANCLIEALGARPTLLILGILFAAVILGIATQLR
HCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FPPPDWIPSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GPVGEELIGLDPPAAANSVALFAIFNGLSRPLFGWLADRLHPHQVTTGSYGLILLACGLM
CCCCCHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
LLPPQGSLLAYWVTFSLLWFCLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCEEEEHHHHHHHHH
TMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANAFLKEKRKLTRQGSHK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]