| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yqgN [H]
Identifier: 86607891
GI number: 86607891
Start: 408866
End: 409492
Strand: Reverse
Name: yqgN [H]
Synonym: CYB_0394
Alternate gene names: 86607891
Gene position: 409492-408866 (Counterclockwise)
Preceding gene: 86607892
Following gene: 86607890
Centisome position: 13.44
GC content: 61.24
Gene sequence:
>627_bases GTGCAGGAACTCCCTTCCCCGGAACTGTCTTCTTCTTGGCGGCCCAGTTCTCTGGCAGCAGATCCTGCCCTAGAAAAAGC TCGCCTGCGCCAGCACTTTCGCCAGCTACGGCAGGGGTTGGACAGATCCCTTATCAGCCAAAAGGTAGTGGCTCATTTGG CCTCTTGCCCCCAACTTTTGGCCGCCAAAACCATCCTGGCCTATGTGGCCTTCGGCTCCGAGGTGGACTTGGGATCCCTG TTTGCCCTTTTTCCAGAGAAGCAGTGGGGGATCCCCCGTTGTCTGCCGCGGCGGCAAATGCAGTGGCACCGCTACCAGCC GGCTGAGCTTGTCCCCAACTGCTGGGGCTTGTTGGAGCCTTCTCCCGGCAGCACAGTTATCGACCCTGGCAAGGCGGATT TGATCCTGGTGCCCGCCCTGGCCTGCGATCGTTGGGGAAGGCGTTTGGGCTATGGCGGCGGCTATTACGACCGCTTTTTG GCCGCTTTGCCGGATCCCAGTGTGCCCAAGTGGGGCATCCTCCCCCAAGCCTGCTTGCTGGAGCAGCCCCTGCCTCAGGA TCCTTGGGATCAGCGCCTGGATGGGATCCAAACCGAGGAGAGGTTCTACGAGACGGGGATCCCCTAG
Upstream 100 bases:
>100_bases TGATCCCCCCCAATGCCACCTTGGATTTTGAAGTGGAGCTCCTGGCCATCCAGTAGATTCAGATCTTGCAGAGACCGAAT ATCCAAGCGGCATTGGGCTT
Downstream 100 bases:
>100_bases ACTAAAGAGGGTGGGCCTTGGAGGAAAAACGATGAGCCAAGTTTGGAAGCCGGCGCAGTGGCTAACCCAAAAGCTGCGTC TTGTCTGCATGAGCTTTGGC
Product: 5-formyltetrahydrofolate cyclo-ligase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQELPSPELSSSWRPSSLAADPALEKARLRQHFRQLRQGLDRSLISQKVVAHLASCPQLLAAKTILAYVAFGSEVDLGSL FALFPEKQWGIPRCLPRRQMQWHRYQPAELVPNCWGLLEPSPGSTVIDPGKADLILVPALACDRWGRRLGYGGGYYDRFL AALPDPSVPKWGILPQACLLEQPLPQDPWDQRLDGIQTEERFYETGIP
Sequences:
>Translated_208_residues MQELPSPELSSSWRPSSLAADPALEKARLRQHFRQLRQGLDRSLISQKVVAHLASCPQLLAAKTILAYVAFGSEVDLGSL FALFPEKQWGIPRCLPRRQMQWHRYQPAELVPNCWGLLEPSPGSTVIDPGKADLILVPALACDRWGRRLGYGGGYYDRFL AALPDPSVPKWGILPQACLLEQPLPQDPWDQRLDGIQTEERFYETGIP >Mature_208_residues MQELPSPELSSSWRPSSLAADPALEKARLRQHFRQLRQGLDRSLISQKVVAHLASCPQLLAAKTILAYVAFGSEVDLGSL FALFPEKQWGIPRCLPRRQMQWHRYQPAELVPNCWGLLEPSPGSTVIDPGKADLILVPALACDRWGRRLGYGGGYYDRFL AALPDPSVPKWGILPQACLLEQPLPQDPWDQRLDGIQTEERFYETGIP
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002698 [H]
Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]
EC number: NA
Molecular weight: Translated: 23352; Mature: 23352
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELPSPELSSSWRPSSLAADPALEKARLRQHFRQLRQGLDRSLISQKVVAHLASCPQLL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKTILAYVAFGSEVDLGSLFALFPEKQWGIPRCLPRRQMQWHRYQPAELVPNCWGLLEP HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHCCCCC SPGSTVIDPGKADLILVPALACDRWGRRLGYGGGYYDRFLAALPDPSVPKWGILPQACLL CCCCCEECCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH EQPLPQDPWDQRLDGIQTEERFYETGIP CCCCCCCCHHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure MQELPSPELSSSWRPSSLAADPALEKARLRQHFRQLRQGLDRSLISQKVVAHLASCPQLL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKTILAYVAFGSEVDLGSLFALFPEKQWGIPRCLPRRQMQWHRYQPAELVPNCWGLLEP HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCHHHCCHHHCCCCC SPGSTVIDPGKADLILVPALACDRWGRRLGYGGGYYDRFLAALPDPSVPKWGILPQACLL CCCCCEECCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHH EQPLPQDPWDQRLDGIQTEERFYETGIP CCCCCCCCHHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]