| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607890
Identifier: 86607890
GI number: 86607890
Start: 408376
End: 408834
Strand: Reverse
Name: 86607890
Synonym: CYB_0392
Alternate gene names: NA
Gene position: 408834-408376 (Counterclockwise)
Preceding gene: 86607891
Following gene: 86607888
Centisome position: 13.42
GC content: 59.91
Gene sequence:
>459_bases ATGAGCCAAGTTTGGAAGCCGGCGCAGTGGCTAACCCAAAAGCTGCGTCTTGTCTGCATGAGCTTTGGCTGTGTGGCATT GGCGGCGCTCTTGCTGGGTTTTGGAGCCATCCCCCTGCAACTGAAGGATTTGCACCTCACCCCCTGCCCGGATACCCCCG AATACACCAACCTGGTTACCAGCAACGGCAACCCCATACCGGCCAGGTGCCTATTCATTGAAGGCACGGTGGTCAACCGC TCCAGAAATACTGTGCTGAATGCGGATGTCTTCGGTCGCCTTTACGATGCCAACGGCAATGAGGTTCTGCCGGAGCGCAC CCGCCTGGGAGCCATCGAGGAGGTTCCCCCCGGCGAAAGCCCCTTCTCCATTCGCATCTCCGTGCCCGTGACCAGCCCGC TGCCTCTGACTATGGAGCAGTTCAAAGCCAGCGGCTTCAGCGGCACCGTGCGCCGTTAA
Upstream 100 bases:
>100_bases GATCCTTGGGATCAGCGCCTGGATGGGATCCAAACCGAGGAGAGGTTCTACGAGACGGGGATCCCCTAGACTAAAGAGGG TGGGCCTTGGAGGAAAAACG
Downstream 100 bases:
>100_bases AGCTGGCGGGTGAAGTCCACCTGGGCCGAGCGCCCCGGCAAATGGAGCTGGGCAACCACCGGCGGGGTTTGGGCGATCAG CCGTCCCCGGCGGAAGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSQVWKPAQWLTQKLRLVCMSFGCVALAALLLGFGAIPLQLKDLHLTPCPDTPEYTNLVTSNGNPIPARCLFIEGTVVNR SRNTVLNADVFGRLYDANGNEVLPERTRLGAIEEVPPGESPFSIRISVPVTSPLPLTMEQFKASGFSGTVRR
Sequences:
>Translated_152_residues MSQVWKPAQWLTQKLRLVCMSFGCVALAALLLGFGAIPLQLKDLHLTPCPDTPEYTNLVTSNGNPIPARCLFIEGTVVNR SRNTVLNADVFGRLYDANGNEVLPERTRLGAIEEVPPGESPFSIRISVPVTSPLPLTMEQFKASGFSGTVRR >Mature_151_residues SQVWKPAQWLTQKLRLVCMSFGCVALAALLLGFGAIPLQLKDLHLTPCPDTPEYTNLVTSNGNPIPARCLFIEGTVVNRS RNTVLNADVFGRLYDANGNEVLPERTRLGAIEEVPPGESPFSIRISVPVTSPLPLTMEQFKASGFSGTVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16610; Mature: 16479
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVWKPAQWLTQKLRLVCMSFGCVALAALLLGFGAIPLQLKDLHLTPCPDTPEYTNLVT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEE SNGNPIPARCLFIEGTVVNRSRNTVLNADVFGRLYDANGNEVLPERTRLGAIEEVPPGES CCCCCCCEEEEEEECEEEECCCCEEEEHHHCEEEECCCCCEECCCHHHCCCCCCCCCCCC PFSIRISVPVTSPLPLTMEQFKASGFSGTVRR CEEEEEEECCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure SQVWKPAQWLTQKLRLVCMSFGCVALAALLLGFGAIPLQLKDLHLTPCPDTPEYTNLVT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCEEEE SNGNPIPARCLFIEGTVVNRSRNTVLNADVFGRLYDANGNEVLPERTRLGAIEEVPPGES CCCCCCCEEEEEEECEEEECCCCEEEEHHHCEEEECCCCCEECCCHHHCCCCCCCCCCCC PFSIRISVPVTSPLPLTMEQFKASGFSGTVRR CEEEEEEECCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA