Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is minC [H]

Identifier: 86607815

GI number: 86607815

Start: 331930

End: 332664

Strand: Direct

Name: minC [H]

Synonym: CYB_0316

Alternate gene names: 86607815

Gene position: 331930-332664 (Clockwise)

Preceding gene: 86607801

Following gene: 86607816

Centisome position: 10.89

GC content: 59.18

Gene sequence:

>735_bases
ATGACGGGATCCCCTACATGGAACCCTGAAATCTCCTCATCTCCAGACTCCTGGGCCACGGGCAGCGTTTACTTTCGGTC
GGATGCCCAGGGGATCCATCTGCACTTGCCCAGCACCTTGCCTTGGGAGGAGCTTTGGGAAAACCTGGTTTGGCAGTTGC
GCAGCCGCAAACCCTACTGGGCCGGAGTCGCTCCCCTCACCCTCTGGAGCCAGCAGCGAGAGCTGGACATGCCCACCCTA
CAACTTCTTGCTGCCCTATTGTCTCAGCATGGACTGCAACTGTGGCGCGTTCAAACTCGATCCCGCTCGACAGCGATTGC
AGCAGCGACGTTGGGGTATTCTGTGGAGCAATCTTCCCTTTTGGAGGCAGTTCCCCTTGCTCCCCCAGACACCACACCTC
TGTACCTACGTTCGACAGTGCGCTCTGGCATGTCCGTGCGTCACAGAGGATCCGTATTCCTGTTGGGGGATCTCAACCCC
GGCGGCGAGATCATTGCCGGAGGAGACGTTTGGGTTTGGGGACGCTTGCGGGGCCTGGTTCACGCGGGGGCCGACGGCGA
CAAGGGAGCTGTAATTTTGGCTTTGCAGTTGGAGCCCACTCAGTTGCGCATTGCCGATCAAGTGGCCCGTCCGCCAGAAG
GTGGATCCCTGCCCAACACCCCTGAAGTGGTTTACCTGCAGGAGGATGTCATCTGCGTCGCCAGCCTTCAGGATTTTTTG
CGGAGAGGAGTATGA

Upstream 100 bases:

>100_bases
CCGCTTTGCTATCAAGGGCAACCGCCGAGAGAGTTTCCCCTGGCTTGGGGGAATGGAATAGGATAGGGCTCTATATTCAG
GCAGACGTTTAAGGGCGGTC

Downstream 100 bases:

>100_bases
GCCGAGTCATTGTCATAACCTCTGGTAAAGGTGGAGTCGGCAAAACCACCGTGACGGCCAACCTGGGCACTGCCTTGGCG
CGCTTGGGTCGCTCGGTGGT

Product: septum formation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTL
QLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNP
GGEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL
RRGV

Sequences:

>Translated_244_residues
MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTL
QLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNP
GGEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL
RRGV
>Mature_243_residues
TGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTLQ
LLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPG
GEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFLR
RGV

Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization [H]

COG id: COG0850

COG function: function code D; Septum formation inhibitor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the minC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016098
- InterPro:   IPR013033
- InterPro:   IPR005526 [H]

Pfam domain/function: PF03775 MinC_C [H]

EC number: NA

Molecular weight: Translated: 26746; Mature: 26615

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYW
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
AGVAPLTLWSQQRELDMPTLQLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSL
CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHCCCCCHHHH
LEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPGGEIIAGGDVWVWGRLRGLV
HHHCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEECCCEEEEEEEHHHE
HAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL
ECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEHHHHHHHH
RRGV
HHCC
>Mature Secondary Structure 
TGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYW
CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
AGVAPLTLWSQQRELDMPTLQLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSL
CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHCCCCCHHHH
LEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPGGEIIAGGDVWVWGRLRGLV
HHHCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEECCCEEEEEEEHHHE
HAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL
ECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEHHHHHHHH
RRGV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]