Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607743

Identifier: 86607743

GI number: 86607743

Start: 256447

End: 256857

Strand: Reverse

Name: 86607743

Synonym: CYB_0244

Alternate gene names: NA

Gene position: 256857-256447 (Counterclockwise)

Preceding gene: 86607744

Following gene: 86607742

Centisome position: 8.43

GC content: 57.42

Gene sequence:

>411_bases
ATGATCATGACTGTTTGTAGCGCTGCGGATCTGGTCAGCCAGTATGCCTCAGGACGGCGCGATTTTCGGGAGATCGATTT
GCAGGGGGCTGAGCTGCAGGGGATCCATTTGGCTGGCGCCGATCTCAGCTATGCCGATTTCAGTGGGGCCAACTTGGCGG
GGGCTAATTTGCGGGGGTGCGATCTCAGTTTTGCCGACTTCAGCGGAGCTAACCTATCGGAAGCCGATTTGCGGGGATGT
CTCCTCTTTGGCAGCAATTTCCGAGGGGCGCTCTTAGAAGGAGCCTTGTTGGATCACGCAGATTTCGATGCCTATACCCA
TTTCCCGAAGGATTTCGATCCCAAGGCCCACCGCCTGCACGGCATCACGGTGGATACCTCCGTGCCTAGCCCACACGACC
CATCGGTCTGA

Upstream 100 bases:

>100_bases
GTTCCATCAACACTGCTAAAAGACCAGCCTGGGGATCCCTGAAGTCCGCCCATACCGGGGTCGATGGAAGGGATCCCCCA
TCGATAACCGAGGAGGCCCG

Downstream 100 bases:

>100_bases
GCTGGGTGGGATCCCCAAGCTGCCCTTTCGGCTTTTTATCCCCCTTTCTCCCTTCCAGCCAGGATAGCAGCGGTCTAGCT
AAAAGACCCTAGGGATCTAA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Pentapeptide Repeat Family Protein; Serine/Threonine Protein Kinase

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC
LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV

Sequences:

>Translated_136_residues
MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC
LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV
>Mature_136_residues
MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC
LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14488; Mature: 14488

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGC
CEEEECHHHHHHHHHHCCCCCHHHHCCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCC
DLSFADFSGANLSEADLRGCLLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLH
CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
GITVDTSVPSPHDPSV
EEEEECCCCCCCCCCC
>Mature Secondary Structure
MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGC
CEEEECHHHHHHHHHHCCCCCHHHHCCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCC
DLSFADFSGANLSEADLRGCLLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLH
CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE
GITVDTSVPSPHDPSV
EEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA