| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yfiQ [C]
Identifier: 86607739
GI number: 86607739
Start: 249359
End: 252145
Strand: Reverse
Name: yfiQ [C]
Synonym: CYB_0240
Alternate gene names: 86607739
Gene position: 252145-249359 (Counterclockwise)
Preceding gene: 86607740
Following gene: 86607738
Centisome position: 8.28
GC content: 62.4
Gene sequence:
>2787_bases ATGTGGCAACGACTGGATCCCAGTGTGGATATCTGGAGGGCCCGATCCCATCCCCTGAATCCCATTTTTCTGCCCCGTTC GGTGGCGGTGGTGGGGGCCACGGAGCGGGAGGGCAGCGTGGGGCGGACGGTGTTGTGGAACCTCATTAGCCACCCCTTTG GCGGCACGGTTTACCCGGTCAATCCCAAGCGGCACCAGGTGTTGGGGATCCGGGCCTACGAGCGGCTGTCCGCTCTGCCG GAGCCGGTGGATCTGGCCATTATCGCCATTCCGGCAGCGGGGGTGCCCAAGGTGGTGCAGGAGTGCGTAGAAGCCGGGGT CAAGGGCGCCATTGTTCTTTCAGCAGGCTTCAAGGAAACGGGCCCTGCTGGCTGGGAGCTGGAGAAGCAAATTCAGCAGA CTATCCAATCGCGTCAGCGGGACGGAGTCCTTAGGAAGCTGCGCTTGATTGGCCCCAACTGCCTGGGGATCCAAAACCCC CACACGGGCTTAAACGCCACCTTTGCTGCCCAGATGGCCCGGCCCGGCAATGTGGGCTTCATCAGCCAAAGTGGGGCCCT GTGCACCTCGATCCTGGACTGGAGCCTGCAGGAAAATGTGGGCTTCAGCGCCTTTATCTCTCTGGGATCGATGCTGGATG TGGGCTGGGGAGACTTAATCGACTACTTGGGCGAGGATCCCCATACCCACAGCATTGTCTTGTACATGGAATCCATCGGG GATGCCCGCTCTTTTCTGTCCGCGGCCCGAGAGGTGGCCCTGAGCAAGCCCATCATTGTCATCAAGGCGGGGCGCACCCA GGCGGCAGCCCAAGCAGCCGCTTCCCACACGGGCTCCCTCACCGGCAGCGACGCAGTGTTGGATGCGGCCTTCCGCCGTT GCGGCGTGCTGCGGGTGGATCACATTGAAGATCTCTTCGACCTGGCGGAGGTGCTGGCCAAACAGCCCCGTCCTCAGGGC CCTCACCTGACCATCCTCACCAATGCCGGCGGGCCAGGGGTGCTGGCCACCGATGCCCTCATTCGCGCCGGGGGATCCCT GGCCCAGCTCTCCCCCCAAACCCTGGAGCAGCTTGAGCGGATCTTGCCCCCCCACTGGAGCCACGGCAATCCCATTGACA TTTTGGGGGATGCCGATCCGGAGCGCTTTGCCCAAGTTTTGGAAGTGGTGTTGCAAGATCCCGGCAGCCAGGGCTGTCTG GTCATCCTCACCCCCCAAGCCATGACGGATCCCACGGCCACTGCCGAGAAAGTGGTGGAGACCTGGCGGCGCAGTGGATC CCGGCAGCCTATCCTGGCCAGTTGGATGGGGGGAGCTGGCGTGGATGCGGGCGAGCACATCCTCAACCAAGCCGGGATCC CCACCTATCGCTACCCGGATCAAGCGGCGCGGGTGTTCGGCTATTTGTGGCGCTTTAGTGACAACCTCAAGGCCCTCTAC GAAACCCCCACCCTGGCTCCCACCAGGCCAGTGGAGCAGGAAAAAGTGCAGCAAACCCTTGCCCAGGCGAGGCGGGAAGG CCGCACGCTTCTCACGGAGGTCGAATCTAAGGAAATCCTGGCCGCCTACGGGATCCCCGTGGTGCCGACGCGGGTGGCCG AGAGCCCCGAAGCAGCAGTGGAAGCTGCCGAGGCCATGGGCTACCCGGTGGTGGTGAAGCTCTACTCCCACACCCTCACC CACAAAACCGATGTGGGCGGCGTGCAGCTCAACCTGCCCGATGCTGAGGCGGTGCGCCGGGCCTTCGGGCAAATCCTCCG CAACGTCAGCGAGAAAGCGGGGCCGGAGCACTTCCAGGGGGTCACGGTGCAGCCGATGGTGGACACGGATGGCTATGAGC TGATCCTGGGGAGCAGCCAGGATCCCCAGTTTGGGCCGGTGTTGCTGTTTGGCAGTGGCGGACAACTGGTGGAGGTGTTT CAAGATCGCTCCATTGGCCTTCCCCCCCTCAACACCACCTTGGCCCGGCGTCTGATGGAAAACACCCTCATCTACAAGGC CCTCAGGGGGGTGCGGGGACGCCCAGCTGTCGATCTGGAGGCCCTAGAACAGCTCTTGGTGCGTTTTAGCCAACTGGTGG CCGAGCAGCGGGAGATTAAAGAGATCGACATCAATCCGCTGCTGGCTTCCAGCGAGGGCCTGCTGGCTTTGGATGCCCGC GTCATTTTGCGAACCGAGCAGGATCCCCAGGTGCCCTTGGCCATCCGCCCCTATCCCACCCAGTACATCTGGAGCTTCCG GGACGGCATCACCATTCGCCCCATTCGCCCTGAAGACGAGCCTTTGGTGATCGATTTTCACCGCCACGTCTCCGATTACA GCGTCTATCTGCGCTACTTCCACCCGATCAAATACAGCGCCCGCATCGCCCACGAGCGCCTTACCCGCATTTGCTTTAAC GATTACGACCGCGAGATTGCCTTAGTAGCAGAAAAACAGGAGCCAGAGGCCAATCGCGTCAGCGGGACGAAGTCCTTAAT CCTCGGCATCAGCCGCCTCTCCAGAAAACATGGCTTTCCCCAAGAAGCAGAGTTTGCCATGCTGGTGGCGGATCCCTACC AACGGCAAGGGATTGGCACAGAGCTGTTGACCCGCCTCATTCAGGTGGCCCGCTGCGAAGGGATCCAGCACCTCACCGGC GAGGTTCTTTGCGAAAACGAGGCCATGCGCCGCCTGTGTCAGCGGCTGGGGTTTCAGTTGCGCCCTTCTCCAGAGGATCC CGGGATCCTCAAGGCTGCTCTGGCTTTAATCTCCGATCCGCCAATCCTCGCCACCTGCTCCCCCTAG
Upstream 100 bases:
>100_bases CAAGACATGAAGGAGCTGTACGTTTTGGCCTATCGGGGCTGCCGGGTGGATTCTGCCCTCTACCACCAGCCGGAACCAGT GTTGGCCTAAGGAGTAGGGT
Downstream 100 bases:
>100_bases AGATCCCCAGAGAACTAAAAACGGTTTACCGACTGGCTTACCGTAGAATAAGACGGGAAGAGTCCTGGCGCTTGTCCCCT CCCCTTTTGGGAGGGGGGTT
Product: acetyl coenzyme A synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 928; Mature: 928
Protein sequence:
>928_residues MWQRLDPSVDIWRARSHPLNPIFLPRSVAVVGATEREGSVGRTVLWNLISHPFGGTVYPVNPKRHQVLGIRAYERLSALP EPVDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKETGPAGWELEKQIQQTIQSRQRDGVLRKLRLIGPNCLGIQNP HTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENVGFSAFISLGSMLDVGWGDLIDYLGEDPHTHSIVLYMESIG DARSFLSAAREVALSKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLDAAFRRCGVLRVDHIEDLFDLAEVLAKQPRPQG PHLTILTNAGGPGVLATDALIRAGGSLAQLSPQTLEQLERILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQGCL VILTPQAMTDPTATAEKVVETWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYRYPDQAARVFGYLWRFSDNLKALY ETPTLAPTRPVEQEKVQQTLAQARREGRTLLTEVESKEILAAYGIPVVPTRVAESPEAAVEAAEAMGYPVVVKLYSHTLT HKTDVGGVQLNLPDAEAVRRAFGQILRNVSEKAGPEHFQGVTVQPMVDTDGYELILGSSQDPQFGPVLLFGSGGQLVEVF QDRSIGLPPLNTTLARRLMENTLIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEGLLALDAR VILRTEQDPQVPLAIRPYPTQYIWSFRDGITIRPIRPEDEPLVIDFHRHVSDYSVYLRYFHPIKYSARIAHERLTRICFN DYDREIALVAEKQEPEANRVSGTKSLILGISRLSRKHGFPQEAEFAMLVADPYQRQGIGTELLTRLIQVARCEGIQHLTG EVLCENEAMRRLCQRLGFQLRPSPEDPGILKAALALISDPPILATCSP
Sequences:
>Translated_928_residues MWQRLDPSVDIWRARSHPLNPIFLPRSVAVVGATEREGSVGRTVLWNLISHPFGGTVYPVNPKRHQVLGIRAYERLSALP EPVDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKETGPAGWELEKQIQQTIQSRQRDGVLRKLRLIGPNCLGIQNP HTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENVGFSAFISLGSMLDVGWGDLIDYLGEDPHTHSIVLYMESIG DARSFLSAAREVALSKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLDAAFRRCGVLRVDHIEDLFDLAEVLAKQPRPQG PHLTILTNAGGPGVLATDALIRAGGSLAQLSPQTLEQLERILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQGCL VILTPQAMTDPTATAEKVVETWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYRYPDQAARVFGYLWRFSDNLKALY ETPTLAPTRPVEQEKVQQTLAQARREGRTLLTEVESKEILAAYGIPVVPTRVAESPEAAVEAAEAMGYPVVVKLYSHTLT HKTDVGGVQLNLPDAEAVRRAFGQILRNVSEKAGPEHFQGVTVQPMVDTDGYELILGSSQDPQFGPVLLFGSGGQLVEVF QDRSIGLPPLNTTLARRLMENTLIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEGLLALDAR VILRTEQDPQVPLAIRPYPTQYIWSFRDGITIRPIRPEDEPLVIDFHRHVSDYSVYLRYFHPIKYSARIAHERLTRICFN DYDREIALVAEKQEPEANRVSGTKSLILGISRLSRKHGFPQEAEFAMLVADPYQRQGIGTELLTRLIQVARCEGIQHLTG EVLCENEAMRRLCQRLGFQLRPSPEDPGILKAALALISDPPILATCSP >Mature_928_residues MWQRLDPSVDIWRARSHPLNPIFLPRSVAVVGATEREGSVGRTVLWNLISHPFGGTVYPVNPKRHQVLGIRAYERLSALP EPVDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKETGPAGWELEKQIQQTIQSRQRDGVLRKLRLIGPNCLGIQNP HTGLNATFAAQMARPGNVGFISQSGALCTSILDWSLQENVGFSAFISLGSMLDVGWGDLIDYLGEDPHTHSIVLYMESIG DARSFLSAAREVALSKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLDAAFRRCGVLRVDHIEDLFDLAEVLAKQPRPQG PHLTILTNAGGPGVLATDALIRAGGSLAQLSPQTLEQLERILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQGCL VILTPQAMTDPTATAEKVVETWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYRYPDQAARVFGYLWRFSDNLKALY ETPTLAPTRPVEQEKVQQTLAQARREGRTLLTEVESKEILAAYGIPVVPTRVAESPEAAVEAAEAMGYPVVVKLYSHTLT HKTDVGGVQLNLPDAEAVRRAFGQILRNVSEKAGPEHFQGVTVQPMVDTDGYELILGSSQDPQFGPVLLFGSGGQLVEVF QDRSIGLPPLNTTLARRLMENTLIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEGLLALDAR VILRTEQDPQVPLAIRPYPTQYIWSFRDGITIRPIRPEDEPLVIDFHRHVSDYSVYLRYFHPIKYSARIAHERLTRICFN DYDREIALVAEKQEPEANRVSGTKSLILGISRLSRKHGFPQEAEFAMLVADPYQRQGIGTELLTRLIQVARCEGIQHLTG EVLCENEAMRRLCQRLGFQLRPSPEDPGILKAALALISDPPILATCSP
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfiQ [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=908, Percent_Identity=35.7929515418502, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI1786949, Length=229, Percent_Identity=22.707423580786, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014089 - InterPro: IPR013650 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR005809 - InterPro: IPR016102 [H]
Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]
EC number: NA
Molecular weight: Translated: 101596; Mature: 101596
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQRLDPSVDIWRARSHPLNPIFLPRSVAVVGATEREGSVGRTVLWNLISHPFGGTVYPV CCCCCCCCCHHEECCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEC NPKRHQVLGIRAYERLSALPEPVDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKET CCCCCEEEEHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCC GPAGWELEKQIQQTIQSRQRDGVLRKLRLIGPNCLGIQNPHTGLNATFAAQMARPGNVGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE ISQSGALCTSILDWSLQENVGFSAFISLGSMLDVGWGDLIDYLGEDPHTHSIVLYMESIG EECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEHHCC DARSFLSAAREVALSKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLDAAFRRCGVLRVD HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEH HIEDLFDLAEVLAKQPRPQGPHLTILTNAGGPGVLATDALIRAGGSLAQLSPQTLEQLER HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHH ILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQGCLVILTPQAMTDPTATAEKVVE HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH TWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYRYPDQAARVFGYLWRFSDNLKALY HHHHCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH ETPTLAPTRPVEQEKVQQTLAQARREGRTLLTEVESKEILAAYGIPVVPTRVAESPEAAV CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCHHHCCCHHHHH EAAEAMGYPVVVKLYSHTLTHKTDVGGVQLNLPDAEAVRRAFGQILRNVSEKAGPEHFQG HHHHHCCCCEEEEEHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCC VTVQPMVDTDGYELILGSSQDPQFGPVLLFGSGGQLVEVFQDRSIGLPPLNTTLARRLME CEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHH NTLIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEGLLALDAR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEE VILRTEQDPQVPLAIRPYPTQYIWSFRDGITIRPIRPEDEPLVIDFHRHVSDYSVYLRYF EEEECCCCCCCCEEECCCCHHHHHHHCCCCEEECCCCCCCCEEEEHHHCCCHHHHHHHHH HPIKYSARIAHERLTRICFNDYDREIALVAEKQEPEANRVSGTKSLILGISRLSRKHGFP CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCC QEAEFAMLVADPYQRQGIGTELLTRLIQVARCEGIQHLTGEVLCENEAMRRLCQRLGFQL CCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHCCCEE RPSPEDPGILKAALALISDPPILATCSP CCCCCCCHHHHHHHHHHCCCCEEEECCC >Mature Secondary Structure MWQRLDPSVDIWRARSHPLNPIFLPRSVAVVGATEREGSVGRTVLWNLISHPFGGTVYPV CCCCCCCCCHHEECCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEC NPKRHQVLGIRAYERLSALPEPVDLAIIAIPAAGVPKVVQECVEAGVKGAIVLSAGFKET CCCCCEEEEHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCC GPAGWELEKQIQQTIQSRQRDGVLRKLRLIGPNCLGIQNPHTGLNATFAAQMARPGNVGF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE ISQSGALCTSILDWSLQENVGFSAFISLGSMLDVGWGDLIDYLGEDPHTHSIVLYMESIG EECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEHHCC DARSFLSAAREVALSKPIIVIKAGRTQAAAQAAASHTGSLTGSDAVLDAAFRRCGVLRVD HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEH HIEDLFDLAEVLAKQPRPQGPHLTILTNAGGPGVLATDALIRAGGSLAQLSPQTLEQLER HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHH ILPPHWSHGNPIDILGDADPERFAQVLEVVLQDPGSQGCLVILTPQAMTDPTATAEKVVE HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH TWRRSGSRQPILASWMGGAGVDAGEHILNQAGIPTYRYPDQAARVFGYLWRFSDNLKALY HHHHCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH ETPTLAPTRPVEQEKVQQTLAQARREGRTLLTEVESKEILAAYGIPVVPTRVAESPEAAV CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHCCCCCCCHHHCCCHHHHH EAAEAMGYPVVVKLYSHTLTHKTDVGGVQLNLPDAEAVRRAFGQILRNVSEKAGPEHFQG HHHHHCCCCEEEEEHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHCC VTVQPMVDTDGYELILGSSQDPQFGPVLLFGSGGQLVEVFQDRSIGLPPLNTTLARRLME CEEEEEECCCCCEEEECCCCCCCCCCEEEECCCCCHHHHHHCCCCCCCCCCHHHHHHHHH NTLIYKALRGVRGRPAVDLEALEQLLVRFSQLVAEQREIKEIDINPLLASSEGLLALDAR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEE VILRTEQDPQVPLAIRPYPTQYIWSFRDGITIRPIRPEDEPLVIDFHRHVSDYSVYLRYF EEEECCCCCCCCEEECCCCHHHHHHHCCCCEEECCCCCCCCEEEEHHHCCCHHHHHHHHH HPIKYSARIAHERLTRICFNDYDREIALVAEKQEPEANRVSGTKSLILGISRLSRKHGFP CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHCCCC QEAEFAMLVADPYQRQGIGTELLTRLIQVARCEGIQHLTGEVLCENEAMRRLCQRLGFQL CCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHCCCEE RPSPEDPGILKAALALISDPPILATCSP CCCCCCCHHHHHHHHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]