| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is sbp [H]
Identifier: 86607738
GI number: 86607738
Start: 248096
End: 249100
Strand: Reverse
Name: sbp [H]
Synonym: CYB_0239
Alternate gene names: 86607738
Gene position: 249100-248096 (Counterclockwise)
Preceding gene: 86607739
Following gene: 86607737
Centisome position: 8.18
GC content: 61.29
Gene sequence:
>1005_bases ATGGGGCGGTGGCTGGGGATGGGATCCCTAATTTTTGGCCTTCTTCTTGGCCTCAGTGGTTGTGTCAGCGGTATGGGCTC AGGGGGATCCAGAGAGGAAGTAGCGATTCTCCTGGCCTCCTTTGCGGTGACGCGGGATGCCTACCGGCAGATCATCCCTG CTTTTGAGGCCGATTGGCTGGCGAAAACGGGGCAACGGGTGCGGGTGGAAAGCAGCTACGGCGGCTCGGCAACGCAATCG CGGGCAGTTATTGACGGGCTGGATGCCGATGTGGTGGCCTTGGCTCTGGCCCTGGATGTGGAGCGCCTCGTGGCTGCCGG TCTCATTCAGCCGGGATGGGAAGCCCGTACCCCCAACCAAGGGATCGTTACCCGTTCGGTGGCAGTAATTGTAACGCGGG AGGGCAACCCCCAGGGGATCCGCTCTTGGCAAGATCTGGCTCGGCCCGGCTTGCAGGTGGTTACCGCCAACCCCAAGACC TCAGGGGGCGCCCGCTGGAACTTTTTAGCCCTCTGGAGCGCTGTCCCTGAACCCCAGGCTCTGGCCTTCACCACCCAGGT CTACAAGAATGTCCGCATTTTGCCGCGGGACTCACGAGAGGCCACCGATGTTTTTTTCCAAAAAGGGCAAGGGGATGCCC TGCTCACCTACGAACATGAGGTGATCTTGGCCAGCCTGCGCGGCCAATCCCTGTTCTATGTGGTGCCGGATCCCAACATT TCCATCGACAACCCCGTAGCCGTGGTGGATGCCAATGTGGATCGCAAAGGCACCCGTGCCGTGGCCGAAGCCTTTGTGGA CTACCTATTCACCCCAGAAGCGCAGCGGGCCTTTGCCGAGGTGGGCTTTCGCCCGGTGGAGCCGACGGTGGCCCAAGAGT TTGCCTGGCGGTACCCTCCTGTTGAGAAGCGGGTTACCGTCGCCGACCTGGGAGGCTGGGAGGTTGTCCAAAGCCGCTTT TTTGCCGATGGGGCCTTGTTTGACCGCATCCAAGCTCAGTTGTAG
Upstream 100 bases:
>100_bases CACTGAAGGGACACCTGCGAACAAATGGGGGATCCCCTCAGCAATCGAGGTGGTCTGGTCTGGGAGAGTTGGGGCCGGGA TCCGCAGGCTGCCGGTGAGC
Downstream 100 bases:
>100_bases GGAGTCTCCCTTGTTTTGGATCCCCGTTCAAGTTATTCTGGGAGCTGTATCAACGGTTTGTTGACAGGTTTACCGTAGAT TAGCCGCGGGTTTAACTTCC
Product: sulfate ABC transporter, periplasmic sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MGRWLGMGSLIFGLLLGLSGCVSGMGSGGSREEVAILLASFAVTRDAYRQIIPAFEADWLAKTGQRVRVESSYGGSATQS RAVIDGLDADVVALALALDVERLVAAGLIQPGWEARTPNQGIVTRSVAVIVTREGNPQGIRSWQDLARPGLQVVTANPKT SGGARWNFLALWSAVPEPQALAFTTQVYKNVRILPRDSREATDVFFQKGQGDALLTYEHEVILASLRGQSLFYVVPDPNI SIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAEVGFRPVEPTVAQEFAWRYPPVEKRVTVADLGGWEVVQSRF FADGALFDRIQAQL
Sequences:
>Translated_334_residues MGRWLGMGSLIFGLLLGLSGCVSGMGSGGSREEVAILLASFAVTRDAYRQIIPAFEADWLAKTGQRVRVESSYGGSATQS RAVIDGLDADVVALALALDVERLVAAGLIQPGWEARTPNQGIVTRSVAVIVTREGNPQGIRSWQDLARPGLQVVTANPKT SGGARWNFLALWSAVPEPQALAFTTQVYKNVRILPRDSREATDVFFQKGQGDALLTYEHEVILASLRGQSLFYVVPDPNI SIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAEVGFRPVEPTVAQEFAWRYPPVEKRVTVADLGGWEVVQSRF FADGALFDRIQAQL >Mature_333_residues GRWLGMGSLIFGLLLGLSGCVSGMGSGGSREEVAILLASFAVTRDAYRQIIPAFEADWLAKTGQRVRVESSYGGSATQSR AVIDGLDADVVALALALDVERLVAAGLIQPGWEARTPNQGIVTRSVAVIVTREGNPQGIRSWQDLARPGLQVVTANPKTS GGARWNFLALWSAVPEPQALAFTTQVYKNVRILPRDSREATDVFFQKGQGDALLTYEHEVILASLRGQSLFYVVPDPNIS IDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAEVGFRPVEPTVAQEFAWRYPPVEKRVTVADLGGWEVVQSRFF ADGALFDRIQAQL
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=307, Percent_Identity=38.7622149837134, Blast_Score=228, Evalue=3e-61, Organism=Escherichia coli, GI1788765, Length=314, Percent_Identity=32.8025477707006, Blast_Score=179, Evalue=2e-46,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR006311 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36280; Mature: 36148
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRWLGMGSLIFGLLLGLSGCVSGMGSGGSREEVAILLASFAVTRDAYRQIIPAFEADWL CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKTGQRVRVESSYGGSATQSRAVIDGLDADVVALALALDVERLVAAGLIQPGWEARTPNQ HHCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GIVTRSVAVIVTREGNPQGIRSWQDLARPGLQVVTANPKTSGGARWNFLALWSAVPEPQA CEEEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHH LAFTTQVYKNVRILPRDSREATDVFFQKGQGDALLTYEHEVILASLRGQSLFYVVPDPNI HHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCC SIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAEVGFRPVEPTVAQEFAWRYPP CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCC VEKRVTVADLGGWEVVQSRFFADGALFDRIQAQL CCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure GRWLGMGSLIFGLLLGLSGCVSGMGSGGSREEVAILLASFAVTRDAYRQIIPAFEADWL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AKTGQRVRVESSYGGSATQSRAVIDGLDADVVALALALDVERLVAAGLIQPGWEARTPNQ HHCCCEEEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GIVTRSVAVIVTREGNPQGIRSWQDLARPGLQVVTANPKTSGGARWNFLALWSAVPEPQA CEEEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHH LAFTTQVYKNVRILPRDSREATDVFFQKGQGDALLTYEHEVILASLRGQSLFYVVPDPNI HHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCEEEEEEEEEEEEEECCCEEEEEECCCCC SIDNPVAVVDANVDRKGTRAVAEAFVDYLFTPEAQRAFAEVGFRPVEPTVAQEFAWRYPP CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCC VEKRVTVADLGGWEVVQSRFFADGALFDRIQAQL CCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]