| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607635
Identifier: 86607635
GI number: 86607635
Start: 145666
End: 146820
Strand: Direct
Name: 86607635
Synonym: CYB_0133
Alternate gene names: NA
Gene position: 145666-146820 (Clockwise)
Preceding gene: 86607632
Following gene: 86607639
Centisome position: 4.78
GC content: 60.26
Gene sequence:
>1155_bases ATGGAGAGAACCCTAGACCAGATTAACCAACGCATTGCCAAAGGCCAGGTGCGGGTGTGGACGGCCCTGGAAGCCAAAGC CAAGCTGGCCACCTTGGGGATCCAGGAAGCCTTTGAGCAGGTGGATGTGATCACCACCGGCACCTTTGAGCCAATGGAGT CTTCAGGAGCCATTGTGAACCTGGGCCATACGGATCCGCCCATCAAGATTCGCCAAGCTTGGCTGAACGGGGTACCGGCC TATGCCGGATTTGGCGCGGTGGATCTTTACCTGGGGGCAGCCCAACCCAGCGAGCAAGCGGATCAAGCCTATGGGGGCGG CCATGTCATTGCCGACCTGGTGGCGGGCAAGCGCGTCCATTTGCGGGCCATCGGCCAAGTGACCGATTGTTACCCCCGCG CCGACTACGAGACCACCCTGACTCGGGATCAGCTCAACCAGTTTTACCTGTTCAACCCCCGCAATGCCTACCAAAACTTC ATCGTCGGGGTGAACGGCGGGGATCGGCCTTTGTACACCTACTTGGGTCTGTTGGAACCGCATCTGGGCAATGCCGTCTA TTCCAACCCGGGAGAGCTATCCCCCTTGTTGAACGATCCCCTGTTGCGCCGGGTGGGGATCGGCAGCCGCATCTTTTTGG GAGGCGGCATCGGCTACGTCGCCTGGGAGGGCACCCAACACTTTCCGCTGCAAAAGCGATTGCCCAACCAAACTCCCATC GGCCCGGCGGCCACTCTAGCCCTGATTGGAGATGCCAAGCAAATGCAGGCGGAATGGGTGAGGGGCTGCTACTTCCGCAA CTACGGTCCCAGCTTGATGTTGGGGGTCGGGATCCCCATTCCCATCCTCGCTCCTGCGGATTTGGAGGCCATCGCCATCC GGGATGAAGAACTGGTGGCACCGGTGATCGACTTTTCCATTCCCCGCCGGGTGCGGCCCACCTTTGGCTTGGTGAGCTAT GCCCAGCTCAAATCCGGCCAGATCACCCTCAATGGCCGCAAGGTTCGCACCGCTCCCCTGGTCAGCCTGCGCCGCTCCAT GCAAATTGCCGAAATCCTCAAGCAATGGATAGAAAGCGGCCAATTTACCCTCACCCAACCTGTCGCCCCCCTGCCCCTGG ATCGGGAGTTTCTCCCCCAAAACCCTCTCAGGTGA
Upstream 100 bases:
>100_bases AGAATTCAAGATGGGAGCGGATCCCTCGACGATCAAGCGATCAAGACTGCCTAGTGCTCCACACCGCCAACGCGACCAAC CATTGCGATCTTTACATCCC
Downstream 100 bases:
>100_bases CGTCCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTCTGTTTGTTTCCAAAC AGAATGGCGGTATCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR
Sequences:
>Translated_384_residues MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR >Mature_384_residues MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR002708 - InterPro: IPR016426 - ProDom: PD011569 [H]
Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 42158; Mature: 42158
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVN CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE LGHTDPPIKIRQAWLNGVPAYAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVH CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEE LRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNFIVGVNGGDRPLYTYLGLLEP EEECCCHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCC HLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI CCCCCEECCCCCCCHHHCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHCCCCCCC GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVA CHHHHEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCEEEEECCHHHHH PVIDFSIPRRVRPTFGLVSYAQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESG HHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC QFTLTQPVAPLPLDREFLPQNPLR CEEEECCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVN CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE LGHTDPPIKIRQAWLNGVPAYAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVH CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEE LRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNFIVGVNGGDRPLYTYLGLLEP EEECCCHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCC HLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI CCCCCEECCCCCCCHHHCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHCCCCCCC GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVA CHHHHEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCEEEEECCHHHHH PVIDFSIPRRVRPTFGLVSYAQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESG HHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC QFTLTQPVAPLPLDREFLPQNPLR CEEEECCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]