Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is yngK [H]

Identifier: 86607578

GI number: 86607578

Start: 87777

End: 90329

Strand: Direct

Name: yngK [H]

Synonym: CYB_0076

Alternate gene names: 86607578

Gene position: 87777-90329 (Clockwise)

Preceding gene: 86607577

Following gene: 86607580

Centisome position: 2.88

GC content: 61.93

Gene sequence:

>2553_bases
ATGCTGTTGGCGGTTCGGTTCCCCAGTCCTTTGGCGGGACGGAGTCCTCAAGCAGGCTGGTCTGGGATGGTGAGGGATCG
TTTCTGGGGCTTCATCTTAAGATCCTTCAAGCCCCTGGCAGTTTGTCTGGGTTTCCTCTGGGTGGGTCTGCTGGTTTGGA
CGGGATCCCCGGTTGCCCACGGCCAAAGCGCTGTCCCCGCTGCGGAGCACTTTCTGACGGTGGTACGCTTGCCAGGGCAG
AACTGGGCCAATATCGAGCGGCAACTGCAGCAGAGCGGCCTCAGCTACCAGGTGATCGACGGGATCGAGCCAGCAGGTTT
GCGGGGGCGCAGCACAGTCTTTTTGCCAAACGTGAATCGCCTAACCGTTGCTCAAGCCCATGCTCTCGCCGAATGGATGC
AACAGGAAGGGGGTCAGTTGATCGTCAGCGGCCCGCTGGAAATCCCTGCTGAGGCACGGGATCCCTTACGCAGCCTGATT
GGCGCCTACTGGAGCGGAGATATTCCTCTGGCCAGTACGGTGCGCCTGACAGAGTTTGCTGAAGCATGGGCCCGCAGCGT
TCAGGCGGCCGATCGCGCCAGCGGTGCGGAGCACTTTGTGGTTGCCGGGGGAGCCCTCTTGCCCACCGGCCCGGAAAGTC
GTCTGGTGGCCGTCTGGGAAGAGGTGGACATGGGGGACAATGCCTATGCGGTGATTGCCAGCCGCCAGAGTGTGTACCTG
GGTTGGCGTTGGGGGGAGTTTCCCGAGGAGACGGCGCAGTTGGATCGGGAGTGGTTGCAAGCGGCTCTGCGCCGGGCCCA
AGGCCGTTTCGCTGCCCTCAGACAGGCTGCTGCCACCCCATCCCCTTTGCCAGCGGTGCGGAGCACCATCAACACCCTGG
AGTTGCTGGCCATGCGCCAAGAGCTGGGGAGCTTGCTGGGTCGGGTAGAGGGATCCCTGTTGCTGGCTCGGGCCACTCAA
GGGGGGGTAGAAGCAGCCGAGTACAAGCCCATTTTGGAGCAAGCCCGCAGCGTGTTGCAACAGCTACCGGCCTGGGTGGA
GGCAGGGCAATACGAGCAGGCGCGGCAGGCTTTTGAACAGGCACGGGCGGATCTGTGGGCCCACTACCCGGTGGATCGGT
TGACGGCTTTGTCTGAGGTACGGGCCATTTGGCTGGATCGGAGCACCATTGTCGAGGCAGGCTCTGAGGCAGGGCTGGCT
CAGATTTTCGATCGCCTGGCTCAGGCTGGCCTCAACACCGTCTTTTTCGAGACGATGAATGCTGGCTTTGCCATTCATCC
CAGCCGCGTCGCCCCCCAACAGAACCCCCTCACCCGTGGCCGGGATCCCTTGCGGGCGGCGGTGCGCTTGGCTCATGAGC
GGGGCCTCGAATTGCACGCTTGGATTTGGACTCTTGCGGTGGGCAACACCCGCCACAATCTGCTGCCGGAGATCAACTTG
CCCCAAGACTACATCGGCCCGGTGCTGACGGCTCACCCCGATTGGGCCAATCTGGACAATCGTGGCCGTCTGTTCCCGCG
CGGGCAGCCGGAAACCTGGCTAGACCCAGCCAATCCGCAGGTGCGCAGCTATCTCCTGGCTCTTACCCGCGAGCTAGTGC
AAGACTACCAGGTAGACGGGATCCACCTGGACTACATCCGCTATCCCTTCCAAAACGCTGCCAGCCGCCAGGTGTTTGGC
TTCGGTCGGGCCGCTCGTCAGGGGTTTCAGCAGTTGTCCGGCGTCGATCCGCTGGAGTTGGATCCCTTGAGGGATCGCTC
CCTCTGGCAGTTGTGGACCCGCTACCGCACCCAGCAGGTGAACGAGGTGGTGGAGGCCATTGCCCGCACCGCCCGCTCCC
TCAACCCGCGCGTGATCCTCTCGGCAGCTGTCTATGCTCTGCCCAAGCAGGAGCGCCTGCAAAGGCTGCAGCAGAACTGG
GAAGAGTGGATCCAGGCAGGGGAGCTGGATTTGTTGATCCCCCTCACCTATGCGGGCAATACACGGCGTTTGGCGCAACT
GGTGCAGCCCAATTTGGAAATTGTCAGCCGCTTCTCCACCCTCTTCGTCCCCAGCCTTAATTTGTTGAACTTGCCGCCCG
TCGAGTTCTTGGATCAACTGCAGGTGGTGCGGGATTTGCCCACCGGGGGGTTTGCTTTATTCTCGGTGCGGCAGCTTACC
CCAGAGCTGGAAGCCATCCTCAGGTCCTCCGCCATTGCCTCGACTCGCATTCCCTATCGGGATCCCTTTGGGGCTGTTCG
GGATCGCTTCCAGGCGCTGCGGCAGGAGTGGATGTTTTTGCTCGAGCAGAAACGGTTGGGGTTGTGGGAGCACAGCCAAT
GGATGGAGCAAATAGAGCGGGTGCAGGGATCCCTGGCGGCCTTGGCAGCGGATCCCACCCCGGAAGCCCTGGAACAAGCC
CGTCAGCAACTGGGCAACTTGAAAACCAATCTTGCCACTTGGATGCGGCTGGAATCTCTGCGCAACCCCTATCGAGTTCA
AGTTTGGGGCAACCGTCTCGCGGCTTTGGAGATGATGCTGCGCTACGGAGAGCAAACCCTGATGAGGGCATGA

Upstream 100 bases:

>100_bases
CACCAACATCATTGTTGAATTGAATAATGTTGAATGGTCTGGGCGGGTGCAGGTTCATATCCGCGCTCCTGACGGATGGT
CTTCAAAGAAAGGAGATCCA

Downstream 100 bases:

>100_bases
AGCTCCCCTCTTGCGGGATGGGGATCCCATCTATCCCCAGAACTTCCCCAGAACCGAAAAAAACTGTTATGGGGTATCTT
TCGGCATTTCCTCTGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MLLAVRFPSPLAGRSPQAGWSGMVRDRFWGFILRSFKPLAVCLGFLWVGLLVWTGSPVAHGQSAVPAAEHFLTVVRLPGQ
NWANIERQLQQSGLSYQVIDGIEPAGLRGRSTVFLPNVNRLTVAQAHALAEWMQQEGGQLIVSGPLEIPAEARDPLRSLI
GAYWSGDIPLASTVRLTEFAEAWARSVQAADRASGAEHFVVAGGALLPTGPESRLVAVWEEVDMGDNAYAVIASRQSVYL
GWRWGEFPEETAQLDREWLQAALRRAQGRFAALRQAAATPSPLPAVRSTINTLELLAMRQELGSLLGRVEGSLLLARATQ
GGVEAAEYKPILEQARSVLQQLPAWVEAGQYEQARQAFEQARADLWAHYPVDRLTALSEVRAIWLDRSTIVEAGSEAGLA
QIFDRLAQAGLNTVFFETMNAGFAIHPSRVAPQQNPLTRGRDPLRAAVRLAHERGLELHAWIWTLAVGNTRHNLLPEINL
PQDYIGPVLTAHPDWANLDNRGRLFPRGQPETWLDPANPQVRSYLLALTRELVQDYQVDGIHLDYIRYPFQNAASRQVFG
FGRAARQGFQQLSGVDPLELDPLRDRSLWQLWTRYRTQQVNEVVEAIARTARSLNPRVILSAAVYALPKQERLQRLQQNW
EEWIQAGELDLLIPLTYAGNTRRLAQLVQPNLEIVSRFSTLFVPSLNLLNLPPVEFLDQLQVVRDLPTGGFALFSVRQLT
PELEAILRSSAIASTRIPYRDPFGAVRDRFQALRQEWMFLLEQKRLGLWEHSQWMEQIERVQGSLAALAADPTPEALEQA
RQQLGNLKTNLATWMRLESLRNPYRVQVWGNRLAALEMMLRYGEQTLMRA

Sequences:

>Translated_850_residues
MLLAVRFPSPLAGRSPQAGWSGMVRDRFWGFILRSFKPLAVCLGFLWVGLLVWTGSPVAHGQSAVPAAEHFLTVVRLPGQ
NWANIERQLQQSGLSYQVIDGIEPAGLRGRSTVFLPNVNRLTVAQAHALAEWMQQEGGQLIVSGPLEIPAEARDPLRSLI
GAYWSGDIPLASTVRLTEFAEAWARSVQAADRASGAEHFVVAGGALLPTGPESRLVAVWEEVDMGDNAYAVIASRQSVYL
GWRWGEFPEETAQLDREWLQAALRRAQGRFAALRQAAATPSPLPAVRSTINTLELLAMRQELGSLLGRVEGSLLLARATQ
GGVEAAEYKPILEQARSVLQQLPAWVEAGQYEQARQAFEQARADLWAHYPVDRLTALSEVRAIWLDRSTIVEAGSEAGLA
QIFDRLAQAGLNTVFFETMNAGFAIHPSRVAPQQNPLTRGRDPLRAAVRLAHERGLELHAWIWTLAVGNTRHNLLPEINL
PQDYIGPVLTAHPDWANLDNRGRLFPRGQPETWLDPANPQVRSYLLALTRELVQDYQVDGIHLDYIRYPFQNAASRQVFG
FGRAARQGFQQLSGVDPLELDPLRDRSLWQLWTRYRTQQVNEVVEAIARTARSLNPRVILSAAVYALPKQERLQRLQQNW
EEWIQAGELDLLIPLTYAGNTRRLAQLVQPNLEIVSRFSTLFVPSLNLLNLPPVEFLDQLQVVRDLPTGGFALFSVRQLT
PELEAILRSSAIASTRIPYRDPFGAVRDRFQALRQEWMFLLEQKRLGLWEHSQWMEQIERVQGSLAALAADPTPEALEQA
RQQLGNLKTNLATWMRLESLRNPYRVQVWGNRLAALEMMLRYGEQTLMRA
>Mature_850_residues
MLLAVRFPSPLAGRSPQAGWSGMVRDRFWGFILRSFKPLAVCLGFLWVGLLVWTGSPVAHGQSAVPAAEHFLTVVRLPGQ
NWANIERQLQQSGLSYQVIDGIEPAGLRGRSTVFLPNVNRLTVAQAHALAEWMQQEGGQLIVSGPLEIPAEARDPLRSLI
GAYWSGDIPLASTVRLTEFAEAWARSVQAADRASGAEHFVVAGGALLPTGPESRLVAVWEEVDMGDNAYAVIASRQSVYL
GWRWGEFPEETAQLDREWLQAALRRAQGRFAALRQAAATPSPLPAVRSTINTLELLAMRQELGSLLGRVEGSLLLARATQ
GGVEAAEYKPILEQARSVLQQLPAWVEAGQYEQARQAFEQARADLWAHYPVDRLTALSEVRAIWLDRSTIVEAGSEAGLA
QIFDRLAQAGLNTVFFETMNAGFAIHPSRVAPQQNPLTRGRDPLRAAVRLAHERGLELHAWIWTLAVGNTRHNLLPEINL
PQDYIGPVLTAHPDWANLDNRGRLFPRGQPETWLDPANPQVRSYLLALTRELVQDYQVDGIHLDYIRYPFQNAASRQVFG
FGRAARQGFQQLSGVDPLELDPLRDRSLWQLWTRYRTQQVNEVVEAIARTARSLNPRVILSAAVYALPKQERLQRLQQNW
EEWIQAGELDLLIPLTYAGNTRRLAQLVQPNLEIVSRFSTLFVPSLNLLNLPPVEFLDQLQVVRDLPTGGFALFSVRQLT
PELEAILRSSAIASTRIPYRDPFGAVRDRFQALRQEWMFLLEQKRLGLWEHSQWMEQIERVQGSLAALAADPTPEALEQA
RQQLGNLKTNLATWMRLESLRNPYRVQVWGNRLAALEMMLRYGEQTLMRA

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=286, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 95387; Mature: 95387

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAVRFPSPLAGRSPQAGWSGMVRDRFWGFILRSFKPLAVCLGFLWVGLLVWTGSPVAH
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GQSAVPAAEHFLTVVRLPGQNWANIERQLQQSGLSYQVIDGIEPAGLRGRSTVFLPNVNR
CCCCCHHHHHHEEHEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCH
LTVAQAHALAEWMQQEGGQLIVSGPLEIPAEARDPLRSLIGAYWSGDIPLASTVRLTEFA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EAWARSVQAADRASGAEHFVVAGGALLPTGPESRLVAVWEEVDMGDNAYAVIASRQSVYL
HHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCEEEEEHHHCCCCCCEEEEEECCEEEE
GWRWGEFPEETAQLDREWLQAALRRAQGRFAALRQAAATPSPLPAVRSTINTLELLAMRQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ELGSLLGRVEGSLLLARATQGGVEAAEYKPILEQARSVLQQLPAWVEAGQYEQARQAFEQ
HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ARADLWAHYPVDRLTALSEVRAIWLDRSTIVEAGSEAGLAQIFDRLAQAGLNTVFFETMN
HHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHC
AGFAIHPSRVAPQQNPLTRGRDPLRAAVRLAHERGLELHAWIWTLAVGNTRHNLLPEINL
CCEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHEECCCHHCCCCCCCC
PQDYIGPVLTAHPDWANLDNRGRLFPRGQPETWLDPANPQVRSYLLALTRELVQDYQVDG
CHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
IHLDYIRYPFQNAASRQVFGFGRAARQGFQQLSGVDPLELDPLRDRSLWQLWTRYRTQQV
EEEHHHHCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NEVVEAIARTARSLNPRVILSAAVYALPKQERLQRLQQNWEEWIQAGELDLLIPLTYAGN
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
TRRLAQLVQPNLEIVSRFSTLFVPSLNLLNLPPVEFLDQLQVVRDLPTGGFALFSVRQLT
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHC
PELEAILRSSAIASTRIPYRDPFGAVRDRFQALRQEWMFLLEQKRLGLWEHSQWMEQIER
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VQGSLAALAADPTPEALEQARQQLGNLKTNLATWMRLESLRNPYRVQVWGNRLAALEMML
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
RYGEQTLMRA
HHCHHHHHCC
>Mature Secondary Structure
MLLAVRFPSPLAGRSPQAGWSGMVRDRFWGFILRSFKPLAVCLGFLWVGLLVWTGSPVAH
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
GQSAVPAAEHFLTVVRLPGQNWANIERQLQQSGLSYQVIDGIEPAGLRGRSTVFLPNVNR
CCCCCHHHHHHEEHEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCH
LTVAQAHALAEWMQQEGGQLIVSGPLEIPAEARDPLRSLIGAYWSGDIPLASTVRLTEFA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EAWARSVQAADRASGAEHFVVAGGALLPTGPESRLVAVWEEVDMGDNAYAVIASRQSVYL
HHHHHHHHHHHHCCCCCEEEEECCEECCCCCCCCEEEEEHHHCCCCCCEEEEEECCEEEE
GWRWGEFPEETAQLDREWLQAALRRAQGRFAALRQAAATPSPLPAVRSTINTLELLAMRQ
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ELGSLLGRVEGSLLLARATQGGVEAAEYKPILEQARSVLQQLPAWVEAGQYEQARQAFEQ
HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ARADLWAHYPVDRLTALSEVRAIWLDRSTIVEAGSEAGLAQIFDRLAQAGLNTVFFETMN
HHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHC
AGFAIHPSRVAPQQNPLTRGRDPLRAAVRLAHERGLELHAWIWTLAVGNTRHNLLPEINL
CCEEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHEECCCHHCCCCCCCC
PQDYIGPVLTAHPDWANLDNRGRLFPRGQPETWLDPANPQVRSYLLALTRELVQDYQVDG
CHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
IHLDYIRYPFQNAASRQVFGFGRAARQGFQQLSGVDPLELDPLRDRSLWQLWTRYRTQQV
EEEHHHHCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
NEVVEAIARTARSLNPRVILSAAVYALPKQERLQRLQQNWEEWIQAGELDLLIPLTYAGN
HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC
TRRLAQLVQPNLEIVSRFSTLFVPSLNLLNLPPVEFLDQLQVVRDLPTGGFALFSVRQLT
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHC
PELEAILRSSAIASTRIPYRDPFGAVRDRFQALRQEWMFLLEQKRLGLWEHSQWMEQIER
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VQGSLAALAADPTPEALEQARQQLGNLKTNLATWMRLESLRNPYRVQVWGNRLAALEMML
HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH
RYGEQTLMRA
HHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]