| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606807
Identifier: 86606807
GI number: 86606807
Start: 2180122
End: 2180589
Strand: Reverse
Name: 86606807
Synonym: CYA_2167
Alternate gene names: NA
Gene position: 2180589-2180122 (Counterclockwise)
Preceding gene: 86606808
Following gene: 86606806
Centisome position: 74.35
GC content: 62.39
Gene sequence:
>468_bases ATGGTTGCCCAAGGGATCCCTGCCCATCGAAGGACACGCCGCTGGCCCTGGGTCTGGGTTCTGCTGCTGTTGTGTTGGCT GGGGTTGGGTGCACCAGCCTGGCCGATTAGCTTGGGGGATCCCTTGCCGGAGTGGGCTCAGTCTATGCAAGTGGGGCGGC AGCGGCTACGCGGCGTGGAGCAGTACCAGGGTCAGGAGCAGATCCGCGCTTACGGCAACCAGGCGGGACGAGTGTTTTGG ATTCAAATCGAAAGCAGTGCCGACCTGCCGCCGGACTACCGGGAGTACTTGGGCGAATACCAACAATTTCCAGTAGAAGT TGTAGCCGTGGTGCCGTTGCGGGCTCGACGGCTGCGCTTCCGTCAGGGGAATCGCGGTGCTGAGTGGCAGGTGGTGGGCA TGAGCGGCCACTTTGAGGCTGAGGCGCTTAGCCACGACCTGGCTCCGCCCGAGTTGTTTCAGCTCTAA
Upstream 100 bases:
>100_bases CCGATGTTGCCTTTGATATTGAAAGGGGGCGGATCGGCTTTCGCCTGCGCTGAGGCCGATTCCCTCTTCTGAAGCCTCGA GTTAACTGCGGAGGAAAGTG
Downstream 100 bases:
>100_bases CCTAGGGGGATCCCCAAGGCGCGATCGGGAAAATTAGGGCTTATTCTAGAGAGAAGCTTGAACTCAGAGGTTGCCAATGA GAATGCTTCAGCAGGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MVAQGIPAHRRTRRWPWVWVLLLLCWLGLGAPAWPISLGDPLPEWAQSMQVGRQRLRGVEQYQGQEQIRAYGNQAGRVFW IQIESSADLPPDYREYLGEYQQFPVEVVAVVPLRARRLRFRQGNRGAEWQVVGMSGHFEAEALSHDLAPPELFQL
Sequences:
>Translated_155_residues MVAQGIPAHRRTRRWPWVWVLLLLCWLGLGAPAWPISLGDPLPEWAQSMQVGRQRLRGVEQYQGQEQIRAYGNQAGRVFW IQIESSADLPPDYREYLGEYQQFPVEVVAVVPLRARRLRFRQGNRGAEWQVVGMSGHFEAEALSHDLAPPELFQL >Mature_155_residues MVAQGIPAHRRTRRWPWVWVLLLLCWLGLGAPAWPISLGDPLPEWAQSMQVGRQRLRGVEQYQGQEQIRAYGNQAGRVFW IQIESSADLPPDYREYLGEYQQFPVEVVAVVPLRARRLRFRQGNRGAEWQVVGMSGHFEAEALSHDLAPPELFQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17859; Mature: 17859
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAQGIPAHRRTRRWPWVWVLLLLCWLGLGAPAWPISLGDPLPEWAQSMQVGRQRLRGVE CCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QYQGQEQIRAYGNQAGRVFWIQIESSADLPPDYREYLGEYQQFPVEVVAVVPLRARRLRF HHCCHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH RQGNRGAEWQVVGMSGHFEAEALSHDLAPPELFQL HCCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHCC >Mature Secondary Structure MVAQGIPAHRRTRRWPWVWVLLLLCWLGLGAPAWPISLGDPLPEWAQSMQVGRQRLRGVE CCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QYQGQEQIRAYGNQAGRVFWIQIESSADLPPDYREYLGEYQQFPVEVVAVVPLRARRLRF HHCCHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHH RQGNRGAEWQVVGMSGHFEAEALSHDLAPPELFQL HCCCCCCCEEEEECCCCCHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA